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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   100304248   uncharacterized LOC100304248 
 zma-u.5   100304248   uncharacterized LOC100304248 
 sbi-r.1   8065386   CST complex subunit CTC1 
 osa-u.5   4346913   CST complex subunit CTC1 
 tae-r.2   123103631   CST complex subunit CTC1 
 tae-r.2   123111841   CST complex subunit CTC1 
 bdi-r.1   100833920   CST complex subunit CTC1 
 ath-u.5   CTC1   conserved telomere maintenance component 1 
 gma-u.5   100816348   CST complex subunit CTC1 
 sly-u.5   101257187   CST complex subunit CTC1-like 
 sly-u.5   101249620   CST complex subunit CTC1-like 
 bra-r.6   103838843   CST complex subunit CTC1 
 vvi-u.5   100242069   CST complex subunit CTC1 
 ppo-u.5   7462901   CST complex subunit CTC1 
 mtr-u.5   120577676   CST complex subunit CTC1 
 ghi-r.1   107907274   CST complex subunit CTC1 
 ghi-r.1   107907339   CST complex subunit CTC1 
 bna-r.1   106360966   CST complex subunit CTC1 
 bna-r.1   106422148   CST complex subunit CTC1 
 sot-r.1   102601984   CST complex subunit CTC1 
 cit-r.1   102626180   CST complex subunit CTC1 
 nta-r.1   107809046   CST complex subunit CTC1 
 nta-r.1   107792111   CST complex subunit CTC1 

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Top 50 coexpressed genes to 100304248 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100304248 (zma-r.6 coexpression data)

CoexMap"100304248"


zmaLOC100304248 | Entrez gene ID : 100304248      
Species zma sbi osa tae bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre hvu
Paralog 2 1 1 2 1 1 1 2 1 1 1 1 2 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010833 [list] [network] telomere maintenance via telomere lengthening  (5 genes)  IEA  
GO:0045740 [list] [network] positive regulation of DNA replication  (7 genes)  IEA  
GO CC
GO:1990879 [list] [network] CST complex  (2 genes)  IEA  
GO MF
GO:0042162 [list] [network] telomeric DNA binding  (19 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (80 genes)  IEA  
Protein NP_001348322.1 [sequence] [blastp]
XP_008651598.2 [sequence] [blastp]
XP_008651599.2 [sequence] [blastp]
XP_008651600.2 [sequence] [blastp]
XP_020396191.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  chlo 1,  mito 1,  plas 1,  pero 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001348322.1)
chlo 6,  nucl 2,  cyto 1  (predict for XP_008651598.2)
chlo 6,  nucl 2,  cyto 1  (predict for XP_008651599.2)
chlo 6,  nucl 2,  cyto 1  (predict for XP_008651600.2)
chlo 6,  nucl 2,  cyto 1  (predict for XP_020396191.1)
Subcellular
localization
TargetP
other 3  (predict for NP_001348322.1)
chlo 8  (predict for XP_008651598.2)
chlo 8  (predict for XP_008651599.2)
chlo 8  (predict for XP_008651600.2)
chlo 8  (predict for XP_020396191.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
100304248
zma-u.5
for
100304248
sbi-r.1
for
8065386
osa-u.5
for
4346913
tae-r.2
for
123103631
tae-r.2
for
123111841
bdi-r.1
for
100833920
ath-u.5
for
CTC1
gma-u.5
for
100816348
sly-u.5
for
101257187
sly-u.5
for
101249620
bra-r.6
for
103838843
vvi-u.5
for
100242069
ppo-u.5
for
7462901
mtr-u.5
for
120577676
ghi-r.1
for
107907274
ghi-r.1
for
107907339
bna-r.1
for
106360966
bna-r.1
for
106422148
sot-r.1
for
102601984
cit-r.1
for
102626180
nta-r.1
for
107809046
nta-r.1
for
107792111


Ortholog ID: 10848
Species zma sbi osa tae tae bdi ath gma sly sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100304248 LOC8065386 LOC4346913 LOC123103631 LOC123111841 LOC100833920 CTC1 LOC100816348 LOC101257187 LOC101249620 LOC103838843 LOC100242069 LOC7462901 LOC120577676 LOC107907274 LOC107907339 LOC106360966 LOC106422148 LOC102601984 LOC102626180 LOC107809046 LOC107792111
Function* uncharacterized LOC100304248 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 conserved telomere maintenance component 1 CST complex subunit CTC1 CST complex subunit CTC1-like CST complex subunit CTC1-like CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1 CST complex subunit CTC1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 2
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03460 Fanconi anemia pathway 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr03440 Homologous recombination 2
mtr00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03450 Non-homologous end-joining 3
ghi03022 Basal transcription factors 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03450 Non-homologous end-joining 3
ghi03022 Basal transcription factors 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100304248 8065386 4346913 123103631 123111841 100833920 826554 100816348 101257187 101249620 103838843 100242069 7462901 120577676 107907274 107907339 106360966 106422148 102601984 102626180 107809046 107792111
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