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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   103641806   zinc finger protein CONSTANS-LIKE 3 
 zma-u.5   103641806   zinc finger protein CONSTANS-LIKE 3 
 zma-u.5   103646270   zinc finger protein CONSTANS-LIKE 3 
 zma-u.5   100281289   Col3 
 zma-u.5   109945560   zinc finger protein CONSTANS-LIKE 3 
 sbi-r.1   8060206   zinc finger protein CONSTANS-LIKE 4 
 sbi-r.1   8059668   zinc finger protein CONSTANS-LIKE 3 
 osa-u.5   4336288   zinc finger protein CONSTANS-LIKE 3 
 osa-u.5   4340746   zinc finger protein HD1-like 
 osa-u.5   4346474   zinc finger protein CO3-like 
 tae-r.2   123045911   zinc finger protein CONSTANS-LIKE 4 
 tae-r.2   123120799   zinc finger protein CO3 
 tae-r.2   123111537   zinc finger protein CO3 
 hvu-r.1   123427128   zinc finger protein CONSTANS-LIKE 5-like 
 hvu-r.1   123403770   zinc finger protein CONSTANS-LIKE 3-like 
 bdi-r.1   100821263   zinc finger protein CONSTANS-LIKE 3 
 bdi-r.1   100834218   zinc finger protein CONSTANS-LIKE 3 
 bdi-r.1   100830296   zinc finger protein HD1 
 ath-u.5   COL5   CONSTANS-like 5 
 ath-u.5   COL3   CONSTANS-like 3 
 gma-u.5   COL2B   zinc finger protein CONSTANS-LIKE 2 
 gma-u.5   COL2a   CONSTANS-like 2a 
 sly-u.5   101268413   zinc finger protein CONSTANS-LIKE 4-like 
 sly-u.5   101246004   CONSTANS 2 
 sly-u.5   100191137   CONSTANS-like protein 
 bra-r.6   103846378   zinc finger protein CONSTANS-LIKE 1 
 bra-r.6   103874359   zinc finger protein CONSTANS-LIKE 4 
 vvi-u.5   100246796   zinc finger protein CONSTANS-LIKE 4 
 vvi-u.5   100248114   zinc finger protein CONSTANS-LIKE 2 
 vvi-u.5   100244502   zinc finger protein CONSTANS-LIKE 5 
 ppo-u.5   7468389   zinc finger protein CONSTANS-LIKE 2 
 ppo-u.5   18107444   zinc finger protein CONSTANS-LIKE 2 
 ppo-u.5   7489168   zinc finger protein CONSTANS-LIKE 4 
 mtr-u.5   11431470   zinc finger protein CONSTANS-LIKE 4 
 mtr-u.5   25497637   zinc finger protein CONSTANS-LIKE 2 
 mtr-u.5   11431452   zinc finger protein CONSTANS-LIKE 4 
 ghi-r.1   107926325   zinc finger protein CONSTANS-LIKE 5 
 ghi-r.1   107920546   zinc finger protein CONSTANS-LIKE 5-like 
 ghi-r.1   107916965   zinc finger protein CONSTANS-LIKE 2 
 bna-r.1   125575402   zinc finger protein CONSTANS-LIKE 4-like 
 bna-r.1   111215057   zinc finger protein CONSTANS-LIKE 3 
 sot-r.1   CO   CONSTANS 
 sot-r.1   102585080   zinc finger protein CONSTANS-LIKE 4-like 
 cit-r.1   102620807   zinc finger protein CONSTANS-LIKE 5 
 cit-r.1   102610606   zinc finger protein CONSTANS-LIKE 4 
 cit-r.1   102610914   zinc finger protein CONSTANS-LIKE 2 
 nta-r.1   107765723   zinc finger protein CONSTANS-LIKE 2-like 
 nta-r.1   107785832   zinc finger protein CONSTANS-LIKE 2 
 nta-r.1   107826614   zinc finger protein CONSTANS-LIKE 3 
 cre-r.1   CHLRE_06g278159v5   uncharacterized protein 
 cre-r.1   CHLRE_12g534100v5   uncharacterized protein 

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Top 50 coexpressed genes to 103641806 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103641806 (zma-r.6 coexpression data)

CoexMap"103641806"


zmaLOC103641806 | Entrez gene ID : 103641806      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 2 3 3 2 3 2 2 3 2 3 3 3 3 2 2 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009909 [list] [network] regulation of flower development  (40 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008663359.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 2,  chlo 1,  extr 1,  cyto_nucl 1  (predict for XP_008663359.1)
Subcellular
localization
TargetP
other 9  (predict for XP_008663359.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
103641806
zma-u.5
for
103641806
zma-u.5
for
103646270
zma-u.5
for
100281289
zma-u.5
for
109945560
sbi-r.1
for
8060206
sbi-r.1
for
8059668
osa-u.5
for
4336288
osa-u.5
for
4340746
osa-u.5
for
4346474
tae-r.2
for
123045911
tae-r.2
for
123120799
tae-r.2
for
123111537
hvu-r.1
for
123427128
hvu-r.1
for
123403770
bdi-r.1
for
100821263
bdi-r.1
for
100834218
bdi-r.1
for
100830296
ath-u.5
for
COL5
ath-u.5
for
COL3
gma-u.5
for
COL2B
gma-u.5
for
COL2a
sly-u.5
for
101268413
sly-u.5
for
101246004
sly-u.5
for
100191137
bra-r.6
for
103846378
bra-r.6
for
103874359
vvi-u.5
for
100246796
vvi-u.5
for
100248114
vvi-u.5
for
100244502
ppo-u.5
for
7468389
ppo-u.5
for
18107444
ppo-u.5
for
7489168
mtr-u.5
for
11431470
mtr-u.5
for
25497637
mtr-u.5
for
11431452
ghi-r.1
for
107926325
ghi-r.1
for
107920546
ghi-r.1
for
107916965
bna-r.1
for
125575402
bna-r.1
for
111215057
sot-r.1
for
CO
sot-r.1
for
102585080
cit-r.1
for
102620807
cit-r.1
for
102610606
cit-r.1
for
102610914
nta-r.1
for
107765723
nta-r.1
for
107785832
nta-r.1
for
107826614
cre-r.1
for
CHLRE_06g278159v5
cre-r.1
for
CHLRE_12g534100v5


Ortholog ID: 543
Species zma zma zma sbi sbi osa osa osa tae hvu bdi bdi bdi ath ath ath gma gma sly sly sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna sot sot sot cit cit cit nta nta nta cre cre
Symbol LOC103646270 LOC100281289 LOC100147736 LOC8060206 LOC8059668 LOC4336288 LOC4340746 LOC4346474 LOC123045911 LOC123427128 LOC100821263 LOC100830296 LOC100825107 COL5 COL2 COL4 COL2a COL8 LOC101246004 LOC100191137 CO1 LOC103864587 LOC103851008 LOC100246796 LOC100248114 LOC100244502 LOC7468389 LOC18107444 LOC7489120 LOC11431470 LOC25497637 LOC11431452 LOC107926325 LOC107931695 LOC107945774 LOC106391078 CO LOC102582832 LOC102578495 LOC102620807 LOC102610606 LOC102610914 LOC107785832 LOC107799876 LOC107814243 CHLRE_06g278159v5 CHLRE_12g534100v5
Function* zinc finger protein CONSTANS-LIKE 3 Col3 uncharacterized LOC100147736 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 3 zinc finger protein CONSTANS-LIKE 3 zinc finger protein HD1-like zinc finger protein CO3-like zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 5-like zinc finger protein CONSTANS-LIKE 3 zinc finger protein HD1 zinc finger protein HD1 CONSTANS-like 5 CONSTANS-like 2 zinc finger CONSTANS-like protein CONSTANS-like 2a zinc finger protein CONSTANS-LIKE 5-like CONSTANS 2 CONSTANS-like protein CONSTANS 1 zinc finger protein CONSTANS-LIKE 3 zinc finger protein CONSTANS-LIKE 1 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 5 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 5 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 5 zinc finger protein CONSTANS-LIKE 5 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 3 CONSTANS zinc finger protein CONSTANS-LIKE 5-like zinc finger protein CONSTANS-LIKE 4-like zinc finger protein CONSTANS-LIKE 5 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 3-like zinc finger protein CONSTANS-LIKE 3-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00562 Inositol phosphate metabolism 3
zma00061 Fatty acid biosynthesis 2
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00330 Arginine and proline metabolism 2
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04081 Hormone signaling 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 4
mtr04712 Circadian rhythm - plant 3
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr01200 Carbon metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
bna00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103646270 100281289 100147736 8060206 8059668 4336288 4340746 4346474 123045911 123427128 100821263 100830296 100825107 835872 821298 832563 100301885 100805693 101246004 100191137 778253 103864587 103851008 100246796 100248114 100244502 7468389 18107444 7489120 11431470 25497637 11431452 107926325 107931695 107945774 106391078 102577671 102582832 102578495 102620807 102610606 102610914 107785832 107799876 107814243 5723575 66055662
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