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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-r.6   109939984   E3 ubiquitin-protein ligase PRT1 
 zma-u.5   109939984   E3 ubiquitin-protein ligase PRT1 
 sbi-r.1   8072488   E3 ubiquitin-protein ligase PRT1 
 osa-u.5   4330014   E3 ubiquitin-protein ligase PRT1 
 tae-r.2   123127747   E3 ubiquitin-protein ligase PRT1 
 hvu-r.1   123401481   E3 ubiquitin-protein ligase PRT1 
 bdi-r.1   100834226   E3 ubiquitin-protein ligase PRT1 
 ath-u.5   PRT1   proteolysis 1 
 gma-u.5   100787174   E3 ubiquitin-protein ligase PRT1 
 gma-u.5   100782681   E3 ubiquitin-protein ligase PRT1 
 sly-u.5   101262151   E3 ubiquitin-protein ligase PRT1 
 bra-r.6   103860257   E3 ubiquitin-protein ligase PRT1 
 bra-r.6   103828597   E3 ubiquitin-protein ligase PRT1 
 vvi-u.5   100260196   E3 ubiquitin-protein ligase PRT1 
 ppo-u.5   18094522   E3 ubiquitin-protein ligase PRT1 
 ppo-u.5   7493207   E3 ubiquitin-protein ligase PRT1 
 ppo-u.5   7488562   E3 ubiquitin-protein ligase PRT1 
 mtr-u.5   11411594   E3 ubiquitin-protein ligase PRT1 
 mtr-u.5   11420563   E3 ubiquitin-protein ligase PRT1 
 ghi-r.1   107908475   E3 ubiquitin-protein ligase PRT1 
 ghi-r.1   107942922   E3 ubiquitin-protein ligase PRT1 
 ghi-r.1   107924605   E3 ubiquitin-protein ligase PRT1 
 bna-r.1   106434821   E3 ubiquitin-protein ligase PRT1 
 bna-r.1   106435360   E3 ubiquitin-protein ligase PRT1 
 bna-r.1   106418658   E3 ubiquitin-protein ligase PRT1 
 sot-r.1   102587216   E3 ubiquitin-protein ligase PRT1 
 cit-r.1   102612140   E3 ubiquitin-protein ligase PRT1-like 
 cit-r.1   102619512   E3 ubiquitin-protein ligase PRT1 
 nta-r.1   107765323   E3 ubiquitin-protein ligase PRT1 
 nta-r.1   107810129   E3 ubiquitin-protein ligase PRT1 
 cre-r.1   CHLRE_02g098200v5   uncharacterized protein 
 cre-r.1   CHLRE_01g007350v5   uncharacterized protein 

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Top 50 coexpressed genes to 109939984 (zma-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109939984 (zma-r.6 coexpression data)

CoexMap"109939984"


zmaLOC109939984 | Entrez gene ID : 109939984    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 1 1 1 1 2 1 2 1 3 2 3 3 1 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (134 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (251 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
Protein XP_020394196.1 [sequence] [blastp]
XP_020394197.1 [sequence] [blastp]
XP_020394199.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_020394196.1)
nucl 9  (predict for XP_020394197.1)
nucl 9  (predict for XP_020394199.1)
Subcellular
localization
TargetP
other 9  (predict for XP_020394196.1)
other 9  (predict for XP_020394197.1)
other 9  (predict for XP_020394199.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-r.6
for
109939984
zma-u.5
for
109939984
sbi-r.1
for
8072488
osa-u.5
for
4330014
tae-r.2
for
123127747
hvu-r.1
for
123401481
bdi-r.1
for
100834226
ath-u.5
for
PRT1
gma-u.5
for
100787174
gma-u.5
for
100782681
sly-u.5
for
101262151
bra-r.6
for
103860257
bra-r.6
for
103828597
vvi-u.5
for
100260196
ppo-u.5
for
18094522
ppo-u.5
for
7493207
ppo-u.5
for
7488562
mtr-u.5
for
11411594
mtr-u.5
for
11420563
ghi-r.1
for
107908475
ghi-r.1
for
107942922
ghi-r.1
for
107924605
bna-r.1
for
106434821
bna-r.1
for
106435360
bna-r.1
for
106418658
sot-r.1
for
102587216
cit-r.1
for
102612140
cit-r.1
for
102619512
nta-r.1
for
107765323
nta-r.1
for
107810129
cre-r.1
for
CHLRE_02g098200v5
cre-r.1
for
CHLRE_01g007350v5


Ortholog ID: 5118
Species zma sbi osa tae tae hvu bdi ath gma gma sly bra bra vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot cit cit nta nta cre cre
Symbol LOC109939984 LOC8072488 LOC4330014 LOC123127747 LOC123144853 LOC123401481 LOC100834226 PRT1 LOC100787174 LOC100782681 LOC101262151 LOC103860257 LOC103828597 LOC100260196 LOC18094522 LOC7493207 LOC7488562 LOC11411594 LOC11420563 LOC107908475 LOC107942922 LOC107887198 LOC106434821 LOC106435360 LOC106361796 LOC102587216 LOC102612140 LOC102619512 LOC107765323 LOC107810129 CHLRE_02g098200v5 CHLRE_01g007350v5
Function* E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 proteolysis 1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1-like E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 E3 ubiquitin-protein ligase PRT1 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03050 Proteasome 3
vvi00190 Oxidative phosphorylation 2
vvi04142 Lysosome 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 7
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109939984 8072488 4330014 123127747 123144853 123401481 100834226 822078 100787174 100782681 101262151 103860257 103828597 100260196 18094522 7493207 7488562 11411594 11420563 107908475 107942922 107887198 106434821 106435360 106361796 102587216 102612140 102619512 107765323 107810129 5725587 5725832
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