ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100192559	acyl-protein thioesterase 2
zma-r.6	100192559	acyl-protein thioesterase 2
zma-u.5	100283662	acyl-protein thioesterase 2
zma-u.5	103635415	acyl-protein thioesterase 1 homolog 1
zma-u.5	103651602	acyl-protein thioesterase 1 homolog 1
sbi-r.1	110433928	acyl-protein thioesterase 1 homolog 1
sbi-r.1	8065302	acyl-protein thioesterase 1 homolog 1
sbi-r.1	8084816	acyl-protein thioesterase 1 homolog 1
osa-u.5	9269686	uncharacterized LOC9269686
osa-u.5	4327131	uncharacterized LOC4327131
tae-r.2	123060528	acyl-protein thioesterase 1 homolog 1
tae-r.2	123061461	acyl-protein thioesterase 1
tae-r.2	123070103	acyl-protein thioesterase 1
hvu-r.1	123443037	acyl-protein thioesterase 1 homolog 1
bdi-r.1	100823264	acyl-protein thioesterase 1 homolog 1
bdi-r.1	100844158	acyl-protein thioesterase 1 homolog 1
bdi-r.1	100844671	acyl-protein thioesterase 1 homolog 1
ath-u.5	AT3G15650	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT5G20060	alpha/beta-Hydrolases superfamily protein
gma-u.5	100782153	acyl-protein thioesterase 2
gma-u.5	100791683	acyl-protein thioesterase 2
gma-u.5	100816153	acyl-protein thioesterase 1 homolog 1
sly-u.5	101243765	uncharacterized LOC101243765
sly-u.5	101261789	uncharacterized LOC101261789
sly-u.5	101266950	uncharacterized LOC101266950
bra-r.6	103856417	acyl-protein thioesterase 2
bra-r.6	103851324	acyl-protein thioesterase 2
bra-r.6	103840583	acyl-protein thioesterase 2
vvi-u.5	100257724	uncharacterized LOC100257724
vvi-u.5	100259338	uncharacterized LOC100259338
vvi-u.5	100246445	uncharacterized LOC100246445
ppo-u.5	7478121	uncharacterized LOC7478121
ppo-u.5	7459016	uncharacterized LOC7459016
ppo-u.5	7471579	uncharacterized LOC7471579
mtr-u.5	25486751	acyl-protein thioesterase 1 homolog 1
mtr-u.5	11421505	acyl-protein thioesterase 2
ghi-r.1	107907442	acyl-protein thioesterase 1 homolog 1
ghi-r.1	107907259	acyl-protein thioesterase 2
ghi-r.1	107906476	acyl-protein thioesterase 2
bna-r.1	106434550	acyl-protein thioesterase 2-like
bna-r.1	106413996	acyl-protein thioesterase 2-like
bna-r.1	106403015	acyl-protein thioesterase 2-like
sot-r.1	102590910	acyl-protein thioesterase 2-like
sot-r.1	102578306	acyl-protein thioesterase 2-like
sot-r.1	102582628	acyl-protein thioesterase 2
cit-r.1	102626093	uncharacterized LOC102626093
cit-r.1	102615940	uncharacterized LOC102615940
cit-r.1	102614923	uncharacterized LOC102614923
nta-r.1	107828639	uncharacterized LOC107828639
nta-r.1	107827345	uncharacterized LOC107827345
nta-r.1	107812511	uncharacterized LOC107812511
cre-r.1	CHLRE_03g164350v5	uncharacterized protein

Top 50 coexpressed genes to 100192559 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100192559 (zma-u.5 coexpression data)

CoexMap"100192559"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00564 [list] [network] Glycerophospholipid metabolism (130 genes)

GO BP

GO CC

GO MF

GO:0016787 [list] [network] hydrolase activity

(3228 genes)

IEA

Protein

NP_001297764.1 [sequence] [blastp]
XP_020397451.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 1, cyto 1, mito 1, plas 1, extr 1, cyto_nucl 1, nucl_plas 1, mito_plas 1, cyto_plas 1	(predict for NP_001297764.1)
chlo 4, nucl 3, chlo_mito 3	(predict for XP_020397451.2)

Subcellular
localization
TargetP

other 4	(predict for NP_001297764.1)
mito 1	(predict for XP_020397451.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100192559	zma-r.6 for 100192559	zma-u.5 for 100283662	zma-u.5 for 103635415	zma-u.5 for 103651602	sbi-r.1 for 110433928	sbi-r.1 for 8065302	sbi-r.1 for 8084816	osa-u.5 for 9269686	osa-u.5 for 4327131	tae-r.2 for 123060528	tae-r.2 for 123061461	tae-r.2 for 123070103	hvu-r.1 for 123443037	bdi-r.1 for 100823264	bdi-r.1 for 100844158	bdi-r.1 for 100844671	ath-u.5 for AT3G15650	ath-u.5 for AT5G20060	gma-u.5 for 100782153	gma-u.5 for 100791683	gma-u.5 for 100816153	sly-u.5 for 101243765	sly-u.5 for 101261789	sly-u.5 for 101266950	bra-r.6 for 103856417	bra-r.6 for 103851324	bra-r.6 for 103840583	vvi-u.5 for 100257724	vvi-u.5 for 100259338	vvi-u.5 for 100246445	ppo-u.5 for 7478121	ppo-u.5 for 7459016	ppo-u.5 for 7471579	mtr-u.5 for 25486751	mtr-u.5 for 11421505	ghi-r.1 for 107907442	ghi-r.1 for 107907259	ghi-r.1 for 107906476	bna-r.1 for 106434550	bna-r.1 for 106413996	bna-r.1 for 106403015	sot-r.1 for 102590910	sot-r.1 for 102578306	sot-r.1 for 102582628	cit-r.1 for 102626093	cit-r.1 for 102615940	cit-r.1 for 102614923	nta-r.1 for 107828639	nta-r.1 for 107827345	nta-r.1 for 107812511	cre-r.1 for CHLRE_03g164350v5

Ortholog

Ortholog ID: 794

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

acyl-protein thioesterase 2

acyl-protein thioesterase 1 homolog 1

uncharacterized LOC9269686

uncharacterized LOC4327131

acyl-protein thioesterase 1 homolog 1

alpha/beta-Hydrolases superfamily protein

acyl-protein thioesterase 1 homolog 1

acyl-protein thioesterase 2

acyl-protein thioesterase 2-like

uncharacterized LOC101243765

uncharacterized LOC101266950

uncharacterized LOC101264846

acyl-protein thioesterase 2

uncharacterized LOC100257724

uncharacterized LOC100259338

uncharacterized LOC100246445

uncharacterized LOC7478121

uncharacterized LOC18107650

uncharacterized LOC7478369

acyl-protein thioesterase 2

acyl-protein thioesterase 2-like

acyl-protein thioesterase 2

acyl-protein thioesterase 1 homolog 1-like

uncharacterized LOC102626093

uncharacterized LOC102615940

uncharacterized LOC102614923

uncharacterized LOC107781149

uncharacterized LOC107776271

uncharacterized LOC107758966

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2
zma03083	Polycomb repressive complex	2
zma00564	Glycerophospholipid metabolism	2
zma00240	Pyrimidine metabolism	2
zma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	5
sbi01200	Carbon metabolism	5
sbi01230	Biosynthesis of amino acids	5
sbi00710	Carbon fixation by Calvin cycle	4
sbi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	3
osa00500	Starch and sucrose metabolism	3
osa00280	Valine, leucine and isoleucine degradation	2
osa00640	Propanoate metabolism	2
osa00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4
tae00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4
tae00020	Citrate cycle (TCA cycle)	3
tae00270	Cysteine and methionine metabolism	3
tae00566	Sulfoquinovose metabolism	3
tae00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	5
bdi00480	Glutathione metabolism	3
bdi00020	Citrate cycle (TCA cycle)	3
bdi00270	Cysteine and methionine metabolism	2
bdi00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00061	Fatty acid biosynthesis	9
ath01212	Fatty acid metabolism	9
ath01240	Biosynthesis of cofactors	8
ath00780	Biotin metabolism	6
ath01200	Carbon metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	3
gma00564	Glycerophospholipid metabolism	2
gma03040	Spliceosome	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4
gma00240	Pyrimidine metabolism	3
gma01232	Nucleotide metabolism	3
gma03030	DNA replication	2
gma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	5
gma04517	IgSF CAM signaling	3
gma05100	Bacterial invasion of epithelial cells	3
gma00190	Oxidative phosphorylation	3
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00564	Glycerophospholipid metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	5
sly00510	N-Glycan biosynthesis	2
sly00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03083	Polycomb repressive complex	2
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	5
ppo00860	Porphyrin metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	6
ghi04016	MAPK signaling pathway - plant	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6
ghi03015	mRNA surveillance pathway	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	2
ghi00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3
sot01230	Biosynthesis of amino acids	2
sot00010	Glycolysis / Gluconeogenesis	2
sot00020	Citrate cycle (TCA cycle)	2
sot00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	2
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	3
cit04136	Autophagy - other	2
cit00564	Glycerophospholipid metabolism	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	5
nta03010	Ribosome	3
nta00564	Glycerophospholipid metabolism	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00564	Glycerophospholipid metabolism	2
cre03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100192559

100283662

103651602

110433928

8065302

8084816

9269686

4327131

123060528

543073

123443037

100823264

100844158

100844671

820808

832128

100816153

100799769

100796190

101243765

101266950

101264846

103856417

103851324

103840583

100257724

100259338

100246445

7478121

18107650

7478369

11421505

11432468

107914846

107931996

107962631

106387500

106386720

106349594

102578306

102582628

102593417

102626093

102615940

102614923

107781149

107776271

107758966

66052791

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	3	2	3	1	3	2	3	3	3	3	3	2	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100192559 (zma-u.5 coexpression data)

Top 50 enrichment test to 100192559 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**