ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100192621	uncharacterized LOC100192621
zma-r.6	100192621	uncharacterized LOC100192621
zma-m.5	100192621	uncharacterized LOC100192621
zma-u.5	100275702	uncharacterized LOC100275702
sbi-r.1	8077200	proline-rich protein PRCC
osa-u.5	4328475	uncharacterized LOC4328475
tae-r.2	123136606	proline-rich protein PRCC
tae-r.2	123144118	proline-rich protein PRCC
tae-r.2	123132535	proline-rich protein PRCC
hvu-r.1	123402539	proline-rich protein PRCC
bdi-r.1	100843468	uncharacterized LOC100843468
ath-u.5	AT2G19270	mitotic checkpoint protein PRCC-carboxy-term protein
gma-u.5	100805518	flocculation protein FLO11-like
gma-u.5	100783897	proline-rich protein PRCC
sly-u.5	101254330	uncharacterized LOC101254330
bra-r.6	103828332	uncharacterized LOC103828332
vvi-u.5	100263241	uncharacterized LOC100263241
ppo-u.5	7474726	uncharacterized LOC7474726
mtr-u.5	11445794	proline-rich protein PRCC
ghi-r.1	107940292	uncharacterized LOC107940292
ghi-r.1	121212617	uncharacterized LOC121212617
bna-r.1	111199181	uncharacterized LOC111199181
bna-r.1	106357622	uncharacterized LOC106357622
sot-r.1	102605950	proline-rich protein PRCC
cit-r.1	102608800	uncharacterized LOC102608800
nta-r.1	107826966	uncharacterized LOC107826966
nta-r.1	107779422	uncharacterized LOC107779422
cre-r.1	CHLRE_06g278258v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(3371 genes)

IEA

GO MF

Protein

NP_001131308.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for NP_001131308.1)

Subcellular
localization
TargetP

other 7, chlo 4

(predict for NP_001131308.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100192621	zma-r.6 for 100192621	zma-m.5 for 100192621	zma-u.5 for 100275702	sbi-r.1 for 8077200	osa-u.5 for 4328475	tae-r.2 for 123136606	tae-r.2 for 123144118	tae-r.2 for 123132535	hvu-r.1 for 123402539	bdi-r.1 for 100843468	ath-u.5 for AT2G19270	gma-u.5 for 100805518	gma-u.5 for 100783897	sly-u.5 for 101254330	bra-r.6 for 103828332	vvi-u.5 for 100263241	ppo-u.5 for 7474726	mtr-u.5 for 11445794	ghi-r.1 for 107940292	ghi-r.1 for 121212617	bna-r.1 for 111199181	bna-r.1 for 106357622	sot-r.1 for 102605950	cit-r.1 for 102608800	nta-r.1 for 107826966	nta-r.1 for 107779422	cre-r.1 for CHLRE_06g278258v5

Ortholog

Ortholog ID: 9387

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100192621

uncharacterized LOC100275702

proline-rich protein PRCC

uncharacterized LOC4328475

proline-rich protein PRCC

uncharacterized LOC100843468

mitotic checkpoint protein PRCC-carboxy-term protein

flocculation protein FLO11-like

proline-rich protein PRCC

uncharacterized LOC101254330

uncharacterized LOC103828332

uncharacterized LOC100263241

uncharacterized LOC7474726

proline-rich protein PRCC

uncharacterized LOC107940292

uncharacterized LOC121212617

uncharacterized LOC111199181

uncharacterized LOC106357622

proline-rich protein PRCC

uncharacterized LOC102608800

uncharacterized LOC107826966

uncharacterized LOC107779422

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	3
tae01040	Biosynthesis of unsaturated fatty acids	3
tae01212	Fatty acid metabolism	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	3
sly00010	Glycolysis / Gluconeogenesis	2
sly01230	Biosynthesis of amino acids	2
sly03018	RNA degradation	2
sly01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03013	Nucleocytoplasmic transport	3
bra03015	mRNA surveillance pathway	3
bra03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	5
ppo00020	Citrate cycle (TCA cycle)	2
ppo01200	Carbon metabolism	2
ppo01210	2-Oxocarboxylic acid metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	2

Expression

Expression pattern

Entrez Gene ID^*

100192621

100275702

8077200

4328475

123136606

123144118

123132535

123402539

100843468

816444

100805518

100783897

101254330

103828332

100263241

7474726

11445794

107940292

121212617

111199181

106357622

102605950

102608800

107826966

107779422

66053718

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100192621 (zma-u.5 coexpression data)

Top 50 enrichment test to 100192621 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	1	1	3	1	1	1	2	1	1	1	1	1	2	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100192621 (zma-u.5 coexpression data)

Top 50 enrichment test to 100192621 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**