ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100272300	uncharacterized LOC100272300
zma-r.6	100272300	uncharacterized LOC100272300
zma-m.5	100272300	uncharacterized LOC100272300
sbi-r.1	110432319	uncharacterized LOC110432319
osa-u.5	4342871	uncharacterized LOC4342871
tae-r.2	123051573	uncharacterized LOC123051573
tae-r.2	123043714	uncharacterized LOC123043714
hvu-r.1	123424736	uncharacterized LOC123424736
bdi-r.1	100836277	uncharacterized LOC100836277
ath-u.5	AT1G21350	Thioredoxin superfamily protein
gma-u.5	100806693	uncharacterized LOC100806693
gma-u.5	100780633	uncharacterized LOC100780633
sly-u.5	101266329	uncharacterized LOC101266329
bra-r.6	103872970	uncharacterized LOC103872970
vvi-u.5	100253998	uncharacterized LOC100253998
ppo-u.5	7466411	uncharacterized LOC7466411
mtr-u.5	11427827	uncharacterized LOC11427827
ghi-r.1	121229523	uncharacterized LOC121229523
ghi-r.1	107914120	uncharacterized LOC107914120
bna-r.1	BNAC05G16600D	uncharacterized BNAC05G16600D
bna-r.1	125610275	uncharacterized LOC125610275
sot-r.1	102589252	uncharacterized LOC102589252
cit-r.1	102623534	uncharacterized LOC102623534
nta-r.1	107768657	peroxiredoxin Q, chloroplastic
nta-r.1	107761969	uncharacterized LOC107761969
cre-r.1	CHLRE_17g715500v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016209 [list] [network] antioxidant activity	(220 genes)	IEA
GO:0016491 [list] [network] oxidoreductase activity	(1495 genes)	IEA

Protein

NP_001353356.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 3

(predict for NP_001353356.1)

Subcellular
localization
TargetP

chlo 9, mito 4

(predict for NP_001353356.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100272300	zma-r.6 for 100272300	zma-m.5 for 100272300	sbi-r.1 for 110432319	osa-u.5 for 4342871	tae-r.2 for 123051573	tae-r.2 for 123043714	hvu-r.1 for 123424736	bdi-r.1 for 100836277	ath-u.5 for AT1G21350	gma-u.5 for 100806693	gma-u.5 for 100780633	sly-u.5 for 101266329	bra-r.6 for 103872970	vvi-u.5 for 100253998	ppo-u.5 for 7466411	mtr-u.5 for 11427827	ghi-r.1 for 121229523	ghi-r.1 for 107914120	bna-r.1 for BNAC05G16600D	bna-r.1 for 125610275	sot-r.1 for 102589252	cit-r.1 for 102623534	nta-r.1 for 107768657	nta-r.1 for 107761969	cre-r.1 for CHLRE_17g715500v5

Ortholog

Ortholog ID: 9220

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100272300

uncharacterized LOC110432319

uncharacterized LOC4342871

uncharacterized LOC123051573

uncharacterized LOC123043714

uncharacterized LOC123187504

uncharacterized LOC123424736

uncharacterized LOC100836277

Thioredoxin superfamily protein

uncharacterized LOC100806693

uncharacterized LOC100780633

uncharacterized LOC101266329

uncharacterized LOC103872970

uncharacterized LOC100253998

uncharacterized LOC7466411

uncharacterized LOC11427827

uncharacterized LOC121229523

uncharacterized LOC107914120

uncharacterized BNAC05G16600D

uncharacterized LOC125610275

uncharacterized LOC102589252

uncharacterized LOC102623534

peroxiredoxin Q, chloroplastic

uncharacterized LOC107761969

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00450	Selenocompound metabolism	2
hvu01200	Carbon metabolism	2
hvu00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	4
gma00230	Purine metabolism	3
gma00710	Carbon fixation by Calvin cycle	3
gma00195	Photosynthesis	2
gma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	4
bra00300	Lysine biosynthesis	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	12
bna01200	Carbon metabolism	9
bna01230	Biosynthesis of amino acids	9
bna00710	Carbon fixation by Calvin cycle	8
bna00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	5
bna00710	Carbon fixation by Calvin cycle	3
bna01200	Carbon metabolism	3
bna01230	Biosynthesis of amino acids	3
bna00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	2
cit00860	Porphyrin metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00196	Photosynthesis - antenna proteins	2
nta00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00061	Fatty acid biosynthesis	7
cre01212	Fatty acid metabolism	7
cre00620	Pyruvate metabolism	6
cre01200	Carbon metabolism	6
cre00640	Propanoate metabolism	4

Expression

Expression pattern

Entrez Gene ID^*

100272300

110432319

4342871

123051573

123043714

123187504

123424736

100836277

838734

100806693

100780633

101266329

103872970

100253998

7466411

11427827

121229523

107914120

106376441

125610275

102589252

102623534

107768657

107761969

5725990

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100272300 (zma-u.5 coexpression data)

Top 50 enrichment test to 100272300 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	2	1	1	1	2	1	1	1	1	1	2	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100272300 (zma-u.5 coexpression data)

Top 50 enrichment test to 100272300 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**