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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100273239   uncharacterized LOC100273239 
 zma-r.6   100273239   uncharacterized LOC100273239 
 zma-m.5   100273239   uncharacterized LOC100273239 
 sbi-r.1   8081599   serine/arginine-rich splicing factor 4 
 osa-u.5   4342206   uncharacterized LOC4342206 
 tae-r.2   123052959   uncharacterized LOC123052959 
 tae-r.2   123045124   serine/arginine-rich splicing factor 4 
 hvu-r.1   123426365   serine/arginine repetitive matrix protein 2 
 bdi-r.1   100830173   serine/arginine-rich splicing factor 4 
 ath-u.5   AT5G53930   transcriptional regulator ATRX-like protein 
 gma-u.5   100805450   pre-mRNA-splicing factor CWC22 homolog 
 gma-u.5   102660802   uncharacterized LOC102660802 
 sly-u.5   101259653   uncharacterized LOC101259653 
 bra-r.6   103852004   transcriptional regulator ATRX homolog 
 vvi-u.5   100248740   uncharacterized LOC100248740 
 ppo-u.5   7460806   uncharacterized LOC7460806 
 mtr-u.5   25487300   serine/threonine-protein kinase PRP4 homolog 
 ghi-r.1   107952089   serine/arginine repetitive matrix protein 2 
 ghi-r.1   107917759   serine/arginine repetitive matrix protein 4 
 bna-r.1   106380948   transcriptional regulator ATRX homolog 
 bna-r.1   106390293   suppressor protein SRP40-like 
 sot-r.1   102596892   DEAD-box ATP-dependent RNA helicase 42 
 cit-r.1   102615532   uncharacterized LOC102615532 
 nta-r.1   107778718   uncharacterized LOC107778718 
 nta-r.1   107826399   uncharacterized LOC107826399 

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Top 50 coexpressed genes to 100273239 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273239 (zma-u.5 coexpression data)

CoexMap"100273239"


zmaLOC100273239 | Entrez gene ID : 100273239      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 2 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001141153.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001141153.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001141153.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100273239
zma-r.6
for
100273239
zma-m.5
for
100273239
sbi-r.1
for
8081599
osa-u.5
for
4342206
tae-r.2
for
123052959
tae-r.2
for
123045124
hvu-r.1
for
123426365
bdi-r.1
for
100830173
ath-u.5
for
AT5G53930
gma-u.5
for
100805450
gma-u.5
for
102660802
sly-u.5
for
101259653
bra-r.6
for
103852004
vvi-u.5
for
100248740
ppo-u.5
for
7460806
mtr-u.5
for
25487300
ghi-r.1
for
107952089
ghi-r.1
for
107917759
bna-r.1
for
106380948
bna-r.1
for
106390293
sot-r.1
for
102596892
cit-r.1
for
102615532
nta-r.1
for
107778718
nta-r.1
for
107826399


Ortholog ID: 10997
Species zma sbi osa tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100273239 LOC8081599 LOC4342206 LOC123052959 LOC123045124 LOC123426365 LOC100830173 AT5G53930 LOC100805450 LOC102660802 LOC101259653 LOC103852004 LOC100248740 LOC7460806 LOC25487300 LOC107952089 LOC107917759 LOC106380948 LOC106390293 LOC102596892 LOC102615532 LOC107778718 LOC107826399
Function* uncharacterized LOC100273239 serine/arginine-rich splicing factor 4 uncharacterized LOC4342206 uncharacterized LOC123052959 serine/arginine-rich splicing factor 4 serine/arginine repetitive matrix protein 2 serine/arginine-rich splicing factor 4 transcriptional regulator ATRX-like protein pre-mRNA-splicing factor CWC22 homolog uncharacterized LOC102660802 uncharacterized LOC101259653 transcriptional regulator ATRX homolog uncharacterized LOC100248740 uncharacterized LOC7460806 serine/threonine-protein kinase PRP4 homolog serine/arginine repetitive matrix protein 2 serine/arginine repetitive matrix protein 4 transcriptional regulator ATRX homolog suppressor protein SRP40-like DEAD-box ATP-dependent RNA helicase 42 uncharacterized LOC102615532 uncharacterized LOC107778718 uncharacterized LOC107826399
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100273239 8081599 4342206 123052959 123045124 123426365 100830173 835476 100805450 102660802 101259653 103852004 100248740 7460806 25487300 107952089 107917759 106380948 106390293 102596892 102615532 107778718 107826399
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