ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100276986	uncharacterized LOC100276986
zma-r.6	100276986	uncharacterized LOC100276986
zma-m.5	100276986	uncharacterized LOC100276986
zma-u.5	100276707	uncharacterized LOC100276707
sbi-r.1	8065323	acrosin
sbi-r.1	8078631	uncharacterized LOC8078631
osa-u.5	4323860	uncharacterized LOC4323860
osa-u.5	4339801	pistil-specific extensin-like protein
tae-r.2	123078447	uncharacterized LOC123078447
tae-r.2	123061347	uncharacterized LOC123061347
tae-r.2	123069986	uncharacterized LOC123069986
hvu-r.1	123443756	uncharacterized LOC123443756
hvu-r.1	123452646	protein VASP homolog
bdi-r.1	100846192	predicted protein
bdi-r.1	100821305	uncharacterized LOC100821305
ath-u.5	AT1G55160	WAS/WASL-interacting family protein
gma-u.5	100782152	uncharacterized LOC100782152
gma-u.5	100305896	uncharacterized LOC100305896
sly-u.5	101268460	uncharacterized LOC101268460
sly-u.5	101252853	uncharacterized LOC101252853
bra-r.6	103832756	uncharacterized LOC103832756
bra-r.6	103832609	uncharacterized LOC103832609
vvi-u.5	100853480	uncharacterized LOC100853480
ppo-u.5	7484672	uncharacterized LOC7484672
ppo-u.5	18094854	uncharacterized LOC18094854
mtr-u.5	25494245	uncharacterized LOC25494245
mtr-u.5	25500442	uncharacterized LOC25500442
mtr-u.5	25500441	uncharacterized LOC25500441
ghi-r.1	121231944	uncharacterized LOC121231944
ghi-r.1	107916364	uncharacterized LOC107916364
ghi-r.1	107897391	uncharacterized LOC107897391
bna-r.1	125609474	uncharacterized LOC125609474
bna-r.1	125601975	uncharacterized LOC125601975
bna-r.1	106443563	uncharacterized LOC106443563
sot-r.1	102590613	uncharacterized LOC102590613
sot-r.1	102594655	uncharacterized LOC102594655
cit-r.1	102609690	uncharacterized LOC102609690
nta-r.1	107830192	uncharacterized LOC107830192
nta-r.1	107822604	uncharacterized LOC107822604
nta-r.1	107816862	uncharacterized LOC107816862

Top 50 coexpressed genes to 100276986 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100276986 (zma-u.5 coexpression data)

CoexMap"100276986"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001144137.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, mito 1

(predict for NP_001144137.1)

Subcellular
localization
TargetP

chlo 9, other 3

(predict for NP_001144137.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100276986	zma-r.6 for 100276986	zma-m.5 for 100276986	zma-u.5 for 100276707	sbi-r.1 for 8065323	sbi-r.1 for 8078631	osa-u.5 for 4323860	osa-u.5 for 4339801	tae-r.2 for 123078447	tae-r.2 for 123061347	tae-r.2 for 123069986	hvu-r.1 for 123443756	hvu-r.1 for 123452646	bdi-r.1 for 100846192	bdi-r.1 for 100821305	ath-u.5 for AT1G55160	gma-u.5 for 100782152	gma-u.5 for 100305896	sly-u.5 for 101268460	sly-u.5 for 101252853	bra-r.6 for 103832756	bra-r.6 for 103832609	vvi-u.5 for 100853480	ppo-u.5 for 7484672	ppo-u.5 for 18094854	mtr-u.5 for 25494245	mtr-u.5 for 25500442	mtr-u.5 for 25500441	ghi-r.1 for 121231944	ghi-r.1 for 107916364	ghi-r.1 for 107897391	bna-r.1 for 125609474	bna-r.1 for 125601975	bna-r.1 for 106443563	sot-r.1 for 102590613	sot-r.1 for 102594655	cit-r.1 for 102609690	nta-r.1 for 107830192	nta-r.1 for 107822604	nta-r.1 for 107816862

Ortholog

Ortholog ID: 4009

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100276986

uncharacterized LOC100276707

acrosin

uncharacterized LOC8078631

uncharacterized LOC4323860

pistil-specific extensin-like protein

uncharacterized LOC123078447

uncharacterized LOC123069986

WW domain-binding protein 11

uncharacterized LOC123443756

protein VASP homolog

predicted protein

uncharacterized LOC100821305

WAS/WASL-interacting family protein

uncharacterized LOC100782152

uncharacterized LOC100305896

uncharacterized LOC101268460

uncharacterized LOC101252853

uncharacterized LOC103832756

uncharacterized LOC103832609

uncharacterized LOC100853480

uncharacterized LOC7484672

uncharacterized LOC18094854

uncharacterized LOC25494245

uncharacterized LOC25500442

uncharacterized LOC25500441

uncharacterized LOC121231944

uncharacterized LOC107916364

uncharacterized LOC107897391

uncharacterized LOC125609474

uncharacterized LOC106443563

uncharacterized LOC106411789

uncharacterized LOC102590613

uncharacterized LOC102594655

uncharacterized LOC102609690

uncharacterized LOC107822604

uncharacterized LOC107816862

uncharacterized LOC107795779

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	8
zma04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	4
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	20
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	7
tae03010	Ribosome	4
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2
bdi04070	Phosphatidylinositol signaling system	2
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04145	Phagosome	7
ath04814	Motor proteins	7
ath04517	IgSF CAM signaling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi00920	Sulfur metabolism	2
ghi01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4
ghi00190	Oxidative phosphorylation	4
ghi03460	Fanconi anemia pathway	2
ghi03082	ATP-dependent chromatin remodeling	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4
ghi00190	Oxidative phosphorylation	4
ghi03460	Fanconi anemia pathway	2
ghi03082	ATP-dependent chromatin remodeling	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00561	Glycerolipid metabolism	3
bna00564	Glycerophospholipid metabolism	3
bna03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	10
nta03083	Polycomb repressive complex	8
nta04141	Protein processing in endoplasmic reticulum	8
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

100276986

100276707

8065323

8078631

4323860

4339801

123078447

123069986

123183401

123443756

123452646

100846192

100821305

841959

100782152

100305896

101268460

101252853

103832756

103832609

100853480

7484672

18094854

25494245

25500442

25500441

121231944

107916364

107897391

125609474

106443563

106411789

102590613

102594655

102609690

107822604

107816862

107795779

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	3	2	2	1	2	2	2	1	2	3	3	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100276986 (zma-u.5 coexpression data)

Top 50 enrichment test to 100276986 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**