ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100277172	uncharacterized LOC100277172
zma-r.6	100277172	uncharacterized LOC100277172
zma-m.5	100277172	uncharacterized LOC100277172
sbi-r.1	8063750	uncharacterized LOC8063750
osa-u.5	4347372	uncharacterized LOC4347372
tae-r.2	123107198	uncharacterized LOC123107198
tae-r.2	123112308	uncharacterized LOC123112308
tae-r.2	123112309	uncharacterized LOC123112309
hvu-r.1	123399160	uncharacterized LOC123399160
hvu-r.1	123399161	uncharacterized LOC123399161
bdi-r.1	100839041	uncharacterized LOC100839041
ath-u.5	AT2G04340	cytoplasmic dynein 2 light intermediate chain
gma-u.5	100527894	uncharacterized LOC100527894
sly-u.5	104648420	uncharacterized LOC104648420
sly-u.5	101264647	uncharacterized LOC101264647
bra-r.6	103828535	uncharacterized LOC103828535
vvi-u.5	100249204	uncharacterized LOC100249204
ppo-u.5	18105365	uncharacterized LOC18105365
mtr-u.5	11446318	uncharacterized LOC11446318
ghi-r.1	107928121	uncharacterized LOC107928121
ghi-r.1	107933871	uncharacterized LOC107933871
bna-r.1	BNACNNG00570D	uncharacterized BNACNNG00570D
bna-r.1	106364355	uncharacterized LOC106364355
sot-r.1	102599632	uncharacterized LOC102599632
sot-r.1	102603770	uncharacterized LOC102603770
cit-r.1	102609354	uncharacterized LOC102609354
nta-r.1	107830031	uncharacterized LOC107830031
nta-r.1	107776021	uncharacterized LOC107776021

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001144290.1 [sequence] [blastp]
XP_008667685.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 1, vacu 1, golg 1, cyto_mito 1, mito_plas 1	(predict for NP_001144290.1)
chlo 8, mito 2	(predict for XP_008667685.2)

Subcellular
localization
TargetP

mito 8	(predict for NP_001144290.1)
mito 8	(predict for XP_008667685.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100277172	zma-r.6 for 100277172	zma-m.5 for 100277172	sbi-r.1 for 8063750	osa-u.5 for 4347372	tae-r.2 for 123107198	tae-r.2 for 123112308	tae-r.2 for 123112309	hvu-r.1 for 123399160	hvu-r.1 for 123399161	bdi-r.1 for 100839041	ath-u.5 for AT2G04340	gma-u.5 for 100527894	sly-u.5 for 104648420	sly-u.5 for 101264647	bra-r.6 for 103828535	vvi-u.5 for 100249204	ppo-u.5 for 18105365	mtr-u.5 for 11446318	ghi-r.1 for 107928121	ghi-r.1 for 107933871	bna-r.1 for BNACNNG00570D	bna-r.1 for 106364355	sot-r.1 for 102599632	sot-r.1 for 102603770	cit-r.1 for 102609354	nta-r.1 for 107830031	nta-r.1 for 107776021

Ortholog

Ortholog ID: 7914

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100277172

uncharacterized LOC8063750

uncharacterized LOC4347372

uncharacterized LOC123112308

uncharacterized LOC123112309

uncharacterized LOC123104083

uncharacterized LOC123399160

uncharacterized LOC123399161

uncharacterized LOC100839041

cytoplasmic dynein 2 light intermediate chain

uncharacterized LOC100527894

uncharacterized LOC104648420

uncharacterized LOC101264647

uncharacterized LOC103828535

uncharacterized LOC100249204

uncharacterized LOC18105365

uncharacterized LOC11446318

uncharacterized LOC107928121

uncharacterized LOC107933871

uncharacterized BNACNNG00570D

uncharacterized LOC106364355

uncharacterized LOC102599632

uncharacterized LOC102603770

uncharacterized LOC102609354

uncharacterized LOC107830031

uncharacterized LOC107776021

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu03013	Nucleocytoplasmic transport	2
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	3
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra00190	Oxidative phosphorylation	2
bra03010	Ribosome	2
bra03013	Nucleocytoplasmic transport	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	5
bna04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	5
sot04070	Phosphatidylinositol signaling system	5
sot04075	Plant hormone signal transduction	5
sot04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01240	Biosynthesis of cofactors	3
cit00790	Folate biosynthesis	2
cit04122	Sulfur relay system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	4
nta00071	Fatty acid degradation	2
nta00310	Lysine degradation	2
nta00360	Phenylalanine metabolism	2
nta00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00360	Phenylalanine metabolism	3
nta00380	Tryptophan metabolism	3
nta03013	Nucleocytoplasmic transport	2
nta03010	Ribosome	2
nta00071	Fatty acid degradation	2

Expression

Expression pattern

Entrez Gene ID^*

100277172

8063750

4347372

123112308

123112309

123104083

123399160

123399161

100839041

814973

100527894

104648420

101264647

103828535

100249204

18105365

11446318

107928121

107933871

106404539

106364355

102599632

102603770

102609354

107830031

107776021

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100277172 (zma-u.5 coexpression data)

Top 50 enrichment test to 100277172 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	3	2	1	1	1	2	1	1	1	1	2	2	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100277172 (zma-u.5 coexpression data)

Top 50 enrichment test to 100277172 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**