ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100277646	uncharacterized LOC100277646
zma-r.6	100277646	uncharacterized LOC100277646
sbi-r.1	8081213	uncharacterized LOC8081213
osa-u.5	4334503	uncharacterized LOC4334503
osa-u.5	4342676	uncharacterized LOC4342676
tae-r.2	123046153	uncharacterized LOC123046153
tae-r.2	123117324	uncharacterized LOC123117324
tae-r.2	123121677	uncharacterized LOC123121677
hvu-r.1	123431400	uncharacterized LOC123431400
hvu-r.1	123452861	uncharacterized LOC123452861
bdi-r.1	100838721	uncharacterized LOC100838721
bdi-r.1	100840194	uncharacterized LOC100840194
ath-u.5	AT3G03870	uncharacterized protein
ath-u.5	AT5G18130	uncharacterized protein
gma-u.5	100795317	uncharacterized LOC100795317
gma-u.5	100787137	uncharacterized LOC100787137
gma-u.5	100779463	uncharacterized LOC100779463
sly-u.5	101247272	uncharacterized LOC101247272
sly-u.5	101267365	uncharacterized LOC101267365
bra-r.6	103855193	uncharacterized LOC103855193
bra-r.6	103845864	uncharacterized LOC103845864
bra-r.6	103856287	uncharacterized LOC103856287
vvi-u.5	100855285	uncharacterized LOC100855285
ppo-u.5	7489666	uncharacterized LOC7489666
ppo-u.5	7469884	uncharacterized LOC7469884
mtr-u.5	11438608	uncharacterized LOC11438608
mtr-u.5	11414497	uncharacterized LOC11414497
ghi-r.1	107891456	uncharacterized LOC107891456
ghi-r.1	107935235	uncharacterized LOC107935235
bna-r.1	106432461	uncharacterized LOC106432461
bna-r.1	106379218	uncharacterized LOC106379218
bna-r.1	106387769	uncharacterized LOC106387769
sot-r.1	102601839	uncharacterized LOC102601839
sot-r.1	102584034	uncharacterized LOC102584034
cit-r.1	102623448	uncharacterized LOC102623448
nta-r.1	107789114	uncharacterized LOC107789114
nta-r.1	107770375	uncharacterized LOC107770375
nta-r.1	107814212	uncharacterized LOC107814212

Top 50 coexpressed genes to 100277646 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100277646 (zma-u.5 coexpression data)

CoexMap"100277646"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001144628.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, mito 1, cyto 1, E.R. 1, chlo_mito 1, cyto_pero 1, E.R._plas 1

(predict for NP_001144628.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001144628.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100277646	zma-r.6 for 100277646	sbi-r.1 for 8081213	osa-u.5 for 4334503	osa-u.5 for 4342676	tae-r.2 for 123046153	tae-r.2 for 123117324	tae-r.2 for 123121677	hvu-r.1 for 123431400	hvu-r.1 for 123452861	bdi-r.1 for 100838721	bdi-r.1 for 100840194	ath-u.5 for AT3G03870	ath-u.5 for AT5G18130	gma-u.5 for 100795317	gma-u.5 for 100787137	gma-u.5 for 100779463	sly-u.5 for 101247272	sly-u.5 for 101267365	bra-r.6 for 103855193	bra-r.6 for 103845864	bra-r.6 for 103856287	vvi-u.5 for 100855285	ppo-u.5 for 7489666	ppo-u.5 for 7469884	mtr-u.5 for 11438608	mtr-u.5 for 11414497	ghi-r.1 for 107891456	ghi-r.1 for 107935235	bna-r.1 for 106432461	bna-r.1 for 106379218	bna-r.1 for 106387769	sot-r.1 for 102601839	sot-r.1 for 102584034	cit-r.1 for 102623448	nta-r.1 for 107789114	nta-r.1 for 107770375	nta-r.1 for 107814212

Ortholog

Ortholog ID: 3458

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100277646

uncharacterized LOC8081213

uncharacterized LOC4334503

uncharacterized LOC4342676

uncharacterized LOC123046153

uncharacterized LOC123117324

uncharacterized LOC123121677

uncharacterized LOC123431400

uncharacterized LOC123452861

uncharacterized LOC100838721

uncharacterized LOC100840194

uncharacterized protein

uncharacterized LOC100795317

uncharacterized LOC100787137

uncharacterized LOC100810509

uncharacterized LOC101247272

uncharacterized LOC101267365

uncharacterized LOC103855193

uncharacterized LOC103856287

uncharacterized LOC103851161

uncharacterized LOC100855285

uncharacterized LOC7489666

uncharacterized LOC7469884

uncharacterized LOC11438608

uncharacterized LOC11414497

uncharacterized LOC107891456

uncharacterized LOC107935235

uncharacterized LOC106387769

uncharacterized LOC106418491

uncharacterized LOC106391338

uncharacterized LOC102601839

uncharacterized LOC102584034

uncharacterized LOC102623448

uncharacterized LOC107789114

uncharacterized LOC107770375

uncharacterized LOC107797772

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	3
osa00592	alpha-Linolenic acid metabolism	2
osa00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00071	Fatty acid degradation	2
bdi00280	Valine, leucine and isoleucine degradation	2
bdi00630	Glyoxylate and dicarboxylate metabolism	2
bdi01200	Carbon metabolism	2
bdi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	3
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	4
gma04136	Autophagy - other	2
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2
bra00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	2
mtr00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna00410	beta-Alanine metabolism	3
bna00310	Lysine degradation	3
bna00240	Pyrimidine metabolism	2
bna00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00071	Fatty acid degradation	5
sot01212	Fatty acid metabolism	5
sot00592	alpha-Linolenic acid metabolism	4
sot01200	Carbon metabolism	3
sot00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	5
nta00330	Arginine and proline metabolism	3
nta00260	Glycine, serine and threonine metabolism	3
nta00860	Porphyrin metabolism	2
nta00250	Alanine, aspartate and glutamate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100277646

8081213

4334503

4342676

123046153

123117324

123121677

123431400

123452861

100838721

100840194

821099

831931

100795317

100787137

100810509

101247272

101267365

103855193

103856287

103851161

100855285

7489666

7469884

11438608

11414497

107891456

107935235

106387769

106418491

106391338

102601839

102584034

102623448

107789114

107770375

107797772

The preparation time of this page was 0.5 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	1	2	3	2	2	2	3	2	3	1	2	2	2	3	2	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100277646 (zma-u.5 coexpression data)

Top 50 enrichment test to 100277646 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**