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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100280091   uncharacterized LOC100280091 
 zma-r.6   100280091   uncharacterized LOC100280091 
 sbi-r.1   8081307   protein SRG1 
 osa-u.5   4326792   protein LATERAL BRANCHING OXIDOREDUCTASE 1 
 tae-r.2   123063284   protein SRG1 
 tae-r.2   123072238   protein SRG1 
 tae-r.2   123080479   protein SRG1 
 hvu-r.1   123440801   protein SRG1 
 bdi-r.1   100844860   probable 2-oxoglutarate-dependent dioxygenase ANS 
 ath-u.5   LBO1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 gma-u.5   100820290   protein SRG1 
 gma-u.5   100785152   protein SRG1 
 sly-u.5   101266862   protein LATERAL BRANCHING OXIDOREDUCTASE 1 
 bra-r.6   103869174   protein SRG1 
 bra-r.6   103835211   protein SRG1 
 vvi-u.5   100263198   protein SRG1 
 ppo-u.5   7475370   protein SRG1 
 mtr-u.5   25488175   protein SRG1 
 ghi-r.1   107916071   protein SRG1 
 ghi-r.1   107896707   protein SRG1 
 bna-r.1   125603030   protein SRG1-like 
 bna-r.1   106454982   protein SRG1-like 
 bna-r.1   125608795   protein SRG1-like 
 sot-r.1   102591514   protein SRG1 
 cit-r.1   102625494   protein SRG1 
 nta-r.1   107818364   protein LATERAL BRANCHING OXIDOREDUCTASE 1-like 
 nta-r.1   107769042   protein LATERAL BRANCHING OXIDOREDUCTASE 1-like 

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Top 50 coexpressed genes to 100280091 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100280091 (zma-u.5 coexpression data)

CoexMap"100280091"


zmaLOC100280091 | Entrez gene ID : 100280091    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 3 1 1 1 2 1 2 1 1 1 2 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00906 [list] [network] Carotenoid biosynthesis (50 genes)
GO BP
GO CC
GO MF
Protein NP_001344878.1 [sequence] [blastp]
XP_023157646.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_nucl 2,  plas 1  (predict for NP_001344878.1)
cyto 5,  nucl 1,  pero 1,  chlo 1,  plas 1,  cysk_nucl 1,  E.R._vacu 1  (predict for XP_023157646.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001344878.1)
other 9  (predict for XP_023157646.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100280091
zma-r.6
for
100280091
sbi-r.1
for
8081307
osa-u.5
for
4326792
tae-r.2
for
123063284
tae-r.2
for
123072238
tae-r.2
for
123080479
hvu-r.1
for
123440801
bdi-r.1
for
100844860
ath-u.5
for
LBO1
gma-u.5
for
100820290
gma-u.5
for
100785152
sly-u.5
for
101266862
bra-r.6
for
103869174
bra-r.6
for
103835211
vvi-u.5
for
100263198
ppo-u.5
for
7475370
mtr-u.5
for
25488175
ghi-r.1
for
107916071
ghi-r.1
for
107896707
bna-r.1
for
125603030
bna-r.1
for
106454982
bna-r.1
for
125608795
sot-r.1
for
102591514
cit-r.1
for
102625494
nta-r.1
for
107818364
nta-r.1
for
107769042


Ortholog ID: 7589
Species zma sbi osa tae tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100280091 LOC8081307 LOC4326792 LOC123063284 LOC123072238 LOC123080479 LOC123440801 LOC100844860 LBO1 LOC100820290 LOC100785152 LOC101266862 LOC103869174 LOC103835211 LOC100263198 LOC7475370 LOC25488175 LOC107916071 LOC107896707 LOC106454982 LOC125608795 LOC106446003 LOC102591514 LOC102625494 LOC107818364 LOC107769042
Function* uncharacterized LOC100280091 protein SRG1 protein LATERAL BRANCHING OXIDOREDUCTASE 1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 probable 2-oxoglutarate-dependent dioxygenase ANS 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein protein SRG1 protein SRG1 protein LATERAL BRANCHING OXIDOREDUCTASE 1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1 protein SRG1-like protein SRG1-like protein SRG1 protein SRG1 protein SRG1 protein LATERAL BRANCHING OXIDOREDUCTASE 1-like protein LATERAL BRANCHING OXIDOREDUCTASE 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 4
gma01240 Biosynthesis of cofactors 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma01200 Carbon metabolism 3
gma00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma00380 Tryptophan metabolism 4
gma00010 Glycolysis / Gluconeogenesis 3
gma00620 Pyruvate metabolism 3
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00910 Nitrogen metabolism 4
nta01230 Biosynthesis of amino acids 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100280091 8081307 4326792 123063284 123072238 123080479 123440801 100844860 821696 100820290 100785152 101266862 103869174 103835211 100263198 7475370 25488175 107916071 107896707 106454982 125608795 106446003 102591514 102625494 107818364 107769042
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