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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103635643   MADS-box transcription factor 4-like 
 zma-r.6   103635643   MADS-box transcription factor 4-like 
 zma-u.5   542019   MADS16 
 zma-u.5   542020   MADS29 
 sbi-r.1   8058469   MADS-box transcription factor 4 
 osa-u.5   4325001   MADS-box transcription factor 2-like 
 osa-u.5   4338842   MADS-box transcription factor 4-like 
 tae-r.2   123080133   MADS-box transcription factor 2 
 tae-r.2   123062944   MADS-box transcription factor 2 
 hvu-r.1   123442572   MADS-box transcription factor 4-like 
 hvu-r.1   123445121   MADS-box transcription factor 2 
 bdi-r.1   100841827   MADS-box transcription factor 2 
 bdi-r.1   100825104   MADS-box transcription factor 4-like 
 bdi-r.1   100823553   MADS-box transcription factor 2-like 
 ath-u.5   PI   K-box region and MADS-box transcription factor family protein 
 gma-u.5   100499997   uncharacterized LOC100499997 
 gma-u.5   100795861   agamous-like MADS-box protein MADS9 
 sly-u.5   TPI   floral homeotic protein PISTILLATA-like 
 sly-u.5   101265756   floral homeotic protein FBP1 
 bra-r.6   103856435   floral homeotic protein PISTILLATA 
 bra-r.6   103851336   floral homeotic protein PISTILLATA 
 vvi-u.5   MADS9   PISTILLATA-like MADS-box protein-like 
 ghi-r.1   107910365   floral homeotic protein PMADS 2-like 
 ghi-r.1   107930469   floral homeotic protein PMADS 2-like 
 ghi-r.1   107937475   agamous-like MADS-box protein MADS9 
 bna-r.1   106371766   floral homeotic protein PISTILLATA 
 bna-r.1   111210341   floral homeotic protein PISTILLATA 
 bna-r.1   106439488   floral homeotic protein PISTILLATA-like 
 cit-r.1   102624201   agamous-like MADS-box protein MADS9 
 cit-r.1   102623916   floral homeotic protein GLOBOSA 
 nta-r.1   107829524   floral homeotic protein GLOBOSA 
 nta-r.1   107812002   floral homeotic protein GLOBOSA-like 
 nta-r.1   107803851   floral homeotic protein PMADS 2 

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Top 50 coexpressed genes to 103635643 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103635643 (zma-u.5 coexpression data)

CoexMap"103635643"


zmaLOC103635643 | Entrez gene ID : 103635643      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ghi bna cit nta cre sot ppo mtr
Paralog 4 1 2 2 2 3 1 2 2 2 1 3 3 2 3 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (124 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (246 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (663 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
Protein NP_001288511.2 [sequence] [blastp]
XP_008656271.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001288511.2)
nucl 6,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  mito_plas 1  (predict for XP_008656271.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001288511.2)
other 6,  mito 3  (predict for XP_008656271.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103635643
zma-r.6
for
103635643
zma-u.5
for
542019
zma-u.5
for
542020
sbi-r.1
for
8058469
osa-u.5
for
4325001
osa-u.5
for
4338842
tae-r.2
for
123080133
tae-r.2
for
123062944
hvu-r.1
for
123442572
hvu-r.1
for
123445121
bdi-r.1
for
100841827
bdi-r.1
for
100825104
bdi-r.1
for
100823553
ath-u.5
for
PI
gma-u.5
for
100499997
gma-u.5
for
100795861
sly-u.5
for
TPI
sly-u.5
for
101265756
bra-r.6
for
103856435
bra-r.6
for
103851336
vvi-u.5
for
MADS9
ghi-r.1
for
107910365
ghi-r.1
for
107930469
ghi-r.1
for
107937475
bna-r.1
for
106371766
bna-r.1
for
111210341
bna-r.1
for
106439488
cit-r.1
for
102624201
cit-r.1
for
102623916
nta-r.1
for
107829524
nta-r.1
for
107812002
nta-r.1
for
107803851


Ortholog ID: 3502
Species zma zma zma sbi osa osa tae tae hvu hvu bdi bdi bdi ath gma gma sly sly bra bra vvi ghi ghi ghi bna bna bna cit cit nta nta nta
Symbol LOC103635643 LOC542019 LOC542020 LOC8058469 LOC4325001 LOC4338842 LOC123062944 LOC542800 LOC123442572 LOC123445121 LOC100841827 LOC100825104 LOC100823553 PI LOC100499997 LOC100817554 TPI LOC101265756 LOC103856435 LOC103851336 MADS9 LOC107930469 LOC107937475 LOC107951493 LOC111210341 LOC106439488 LOC106434682 LOC102624201 LOC102623916 LOC107829524 LOC107812002 LOC107811598
Function* MADS-box transcription factor 4-like MADS16 MADS29 MADS-box transcription factor 4 MADS-box transcription factor 2-like MADS-box transcription factor 4-like MADS-box transcription factor 2 MADS-box transcription factor 2 MADS-box transcription factor 4-like MADS-box transcription factor 2 MADS-box transcription factor 2 MADS-box transcription factor 4-like MADS-box transcription factor 2-like K-box region and MADS-box transcription factor family protein uncharacterized LOC100499997 floral homeotic protein GLOBOSA-like floral homeotic protein PISTILLATA-like floral homeotic protein FBP1 floral homeotic protein PISTILLATA floral homeotic protein PISTILLATA PISTILLATA-like MADS-box protein-like floral homeotic protein PMADS 2-like agamous-like MADS-box protein MADS9 agamous-like MADS-box protein MADS9 floral homeotic protein PISTILLATA floral homeotic protein PISTILLATA-like floral homeotic protein PISTILLATA agamous-like MADS-box protein MADS9 floral homeotic protein GLOBOSA floral homeotic protein GLOBOSA floral homeotic protein GLOBOSA-like floral homeotic protein PMADS 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae00062 Fatty acid elongation 2
tae04626 Plant-pathogen interaction 2
tae00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 2
hvu00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00350 Tyrosine metabolism 2
sly00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
vvi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103635643 542019 542020 8058469 4325001 4338842 123062944 542800 123442572 123445121 100841827 100825104 100823553 832146 100499997 100817554 778306 101265756 103856435 103851336 100232978 107930469 107937475 107951493 111210341 106439488 106434682 102624201 102623916 107829524 107812002 107811598
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