ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103643196	fatty acyl-CoA reductase 1
zma-r.6	103643196	fatty acyl-CoA reductase 1
zma-u.5	100285021	male sterility protein 2
zma-u.5	100501369	Fatty acyl-CoA reductase 1
zma-u.5	103639542	fatty acyl-CoA reductase 2, chloroplastic
sbi-r.1	8072774	fatty acyl-CoA reductase 1
osa-u.5	4335559	fatty acyl-CoA reductase 1
osa-u.5	4346301	fatty acyl-CoA reductase 1
osa-u.5	4347887	putative fatty acyl-CoA reductase 7
tae-r.2	123057499	fatty acyl-CoA reductase 1
tae-r.2	123057506	probable fatty acyl-CoA reductase 5
hvu-r.1	123412496	fatty acyl-CoA reductase 1-like
bdi-r.1	100822349	fatty acyl-CoA reductase 1
bdi-r.1	100824003	fatty acyl-CoA reductase 3
bdi-r.1	100842081	fatty acyl-CoA reductase 1
ath-u.5	CER4	Jojoba acyl CoA reductase-related male sterility protein
sly-u.5	101267260	fatty acyl-CoA reductase 2, chloroplastic-like
sly-u.5	101260757	fatty acyl-CoA reductase 2, chloroplastic-like
sly-u.5	101260469	fatty acyl-CoA reductase 2, chloroplastic-like
bra-r.6	103845856	fatty acyl-CoA reductase 2
bra-r.6	103873613	probable fatty acyl-CoA reductase 4
bra-r.6	103830063	fatty acyl-CoA reductase 6, chloroplastic
vvi-u.5	100259719	fatty acyl-CoA reductase 3
ppo-u.5	7479040	fatty acyl-CoA reductase 3
ppo-u.5	7474948	fatty acyl-CoA reductase 3
mtr-u.5	11406049	fatty acyl-CoA reductase 3
ghi-r.1	107889164	alcohol-forming fatty acyl-CoA reductase
ghi-r.1	107961703	fatty acyl-CoA reductase 3
ghi-r.1	107953279	fatty acyl-CoA reductase 3
bna-r.1	106403161	probable fatty acyl-CoA reductase 4
cit-r.1	102617900	fatty acyl-CoA reductase 3-like
nta-r.1	107770654	alcohol-forming fatty acyl-CoA reductase-like
nta-r.1	107765773	fatty acyl-CoA reductase 2, chloroplastic
cre-r.1	CHLRE_03g171700v5	uncharacterized protein

Top 50 coexpressed genes to 103643196 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103643196 (zma-u.5 coexpression data)

CoexMap"103643196"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00073 [list] [network] Cutin, suberine and wax biosynthesis (35 genes)

zma04146 [list] [network] Peroxisome (106 genes)

GO BP

GO:0010345 [list] [network] suberin biosynthetic process	(5 genes)	IEA
GO:0035336 [list] [network] long-chain fatty-acyl-CoA metabolic process	(5 genes)	IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(6389 genes)

IEA

GO MF

GO:0080019 [list] [network] alcohol-forming very long-chain fatty acyl-CoA reductase activity

(5 genes)

IEA

Protein

XP_008664571.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 1, E.R. 1, cyto_E.R. 1, mito 1, plas 1, extr 1, vacu 1, cyto_nucl 1, cyto_pero 1, mito_plas 1

(predict for XP_008664571.1)

Subcellular
localization
TargetP

other 8

(predict for XP_008664571.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103643196	zma-r.6 for 103643196	zma-u.5 for 100285021	zma-u.5 for 100501369	zma-u.5 for 103639542	sbi-r.1 for 8072774	osa-u.5 for 4335559	osa-u.5 for 4346301	osa-u.5 for 4347887	tae-r.2 for 123057499	tae-r.2 for 123057506	hvu-r.1 for 123412496	bdi-r.1 for 100822349	bdi-r.1 for 100824003	bdi-r.1 for 100842081	ath-u.5 for CER4	sly-u.5 for 101267260	sly-u.5 for 101260757	sly-u.5 for 101260469	bra-r.6 for 103845856	bra-r.6 for 103873613	bra-r.6 for 103830063	vvi-u.5 for 100259719	ppo-u.5 for 7479040	ppo-u.5 for 7474948	mtr-u.5 for 11406049	ghi-r.1 for 107889164	ghi-r.1 for 107961703	ghi-r.1 for 107953279	bna-r.1 for 106403161	cit-r.1 for 102617900	nta-r.1 for 107770654	nta-r.1 for 107765773	cre-r.1 for CHLRE_03g171700v5

Ortholog

Ortholog ID: 138

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

FAR5

FAR4

Function^*

fatty acyl-CoA reductase 1

male sterility protein 2

Fatty acyl-CoA reductase 1

fatty acyl-CoA reductase 1

probable fatty acyl-CoA reductase 4

fatty acyl-CoA reductase 2, chloroplastic

alcohol-forming fatty acyl-CoA reductase

fatty acyl-CoA reductase 1-like

fatty acyl-CoA reductase 1

probable fatty acyl-CoA reductase 4

fatty acid reductase 5

fatty acid reductase 4

fatty acyl-CoA reductase 3

fatty acyl-CoA reductase 3-like

probable fatty acyl-CoA reductase 4

fatty acyl-CoA reductase 2, chloroplastic

fatty acyl-CoA reductase 6, chloroplastic

fatty acyl-CoA reductase 3

alcohol-forming fatty acyl-CoA reductase

fatty acyl-CoA reductase 2, chloroplastic

alcohol-forming fatty acyl-CoA reductase

fatty acyl-CoA reductase 3

fatty acyl-CoA reductase 2, chloroplastic

fatty acyl-CoA reductase 6, chloroplastic

fatty acyl-CoA reductase 3

fatty acyl-CoA reductase 2-like

fatty acyl-CoA reductase 3-like

fatty acyl-CoA reductase 2, chloroplastic

probable fatty acyl-CoA reductase 4

alcohol-forming fatty acyl-CoA reductase-like

fatty acyl-CoA reductase 2, chloroplastic

fatty acyl-CoA reductase 3-like

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	3
zma00910	Nitrogen metabolism	2
zma00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	4
sbi04075	Plant hormone signal transduction	2
sbi00940	Phenylpropanoid biosynthesis	2
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00073	Cutin, suberine and wax biosynthesis	5
sbi00940	Phenylpropanoid biosynthesis	3
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04146	Peroxisome	5
osa00071	Fatty acid degradation	4
osa01212	Fatty acid metabolism	4
osa03018	RNA degradation	3
osa00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	2
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	5
tae00073	Cutin, suberine and wax biosynthesis	3
tae04146	Peroxisome	3
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00410	beta-Alanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	5
tae02010	ABC transporters	4
tae04981	Folate transport and metabolism	4
tae04146	Peroxisome	3
tae00062	Fatty acid elongation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00073	Cutin, suberine and wax biosynthesis	2
bdi04146	Peroxisome	2
bdi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00073	Cutin, suberine and wax biosynthesis	2
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	4
ath02010	ABC transporters	3
ath04981	Folate transport and metabolism	3
ath04146	Peroxisome	2
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00073	Cutin, suberine and wax biosynthesis	4
ath04146	Peroxisome	2
ath00940	Phenylpropanoid biosynthesis	2
ath02010	ABC transporters	2
ath04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00073	Cutin, suberine and wax biosynthesis	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	4
sly04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04146	Peroxisome	3
sly00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00196	Photosynthesis - antenna proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	4
ppo00062	Fatty acid elongation	3
ppo04626	Plant-pathogen interaction	3
ppo00564	Glycerophospholipid metabolism	2
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	2
ppo00941	Flavonoid biosynthesis	2
ppo00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00073	Cutin, suberine and wax biosynthesis	5
mtr04146	Peroxisome	3
mtr00564	Glycerophospholipid metabolism	2
mtr00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00905	Brassinosteroid biosynthesis	2
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi04146	Peroxisome	2
ghi00941	Flavonoid biosynthesis	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	3
bna00073	Cutin, suberine and wax biosynthesis	2
bna04146	Peroxisome	2
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00073	Cutin, suberine and wax biosynthesis	5
bna04146	Peroxisome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00904	Diterpenoid biosynthesis	4
nta01212	Fatty acid metabolism	3
nta00073	Cutin, suberine and wax biosynthesis	2
nta04146	Peroxisome	2
nta00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03018	RNA degradation	3

Expression

Expression pattern

Entrez Gene ID^*

103643196

100285021

100501369

8072774

8072775

8063746

107278422

123172362

123084801

543003

123412496

100822349

100842081

100827426

823580

823579

100788994

101255436

101249557

101262598

103830063

103863090

100259719

7479040

7479041

25492296

25483583

107889164

107932424

107891237

106356741

106361089

102593077

102617900

102627670

102619505

107770654

107765773

107819278

66052839

The preparation time of this page was 0.3 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	sly	bra	vvi	ppo	mtr	ghi	bna	cit	nta	cre	sot	gma
Paralog	5	1	3	2	1	3	1	3	3	1	2	1	3	1	1	2	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103643196 (zma-u.5 coexpression data)

Top 50 enrichment test to 103643196 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**