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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103647916   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 zma-r.6   103647916   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 sbi-r.1   8063285   pentatricopeptide repeat-containing protein At3g46790, chloroplastic 
 osa-u.5   4350065   pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 tae-r.2   123086543   pentatricopeptide repeat-containing protein At3g12770 
 tae-r.2   123096352   pentatricopeptide repeat-containing protein At3g12770 
 hvu-r.1   123447883   pentatricopeptide repeat-containing protein At3g12770-like 
 bdi-r.1   100831064   pentatricopeptide repeat-containing protein At3g12770 
 gma-u.5   100812370   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 mtr-u.5   25488485   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 

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Top 50 coexpressed genes to 103647916 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103647916 (zma-u.5 coexpression data)

CoexMap"103647916"


zmaLOC103647916 | Entrez gene ID : 103647916    
Species zma sbi osa tae hvu bdi gma mtr cit sly sot bra ath bna ppo vvi ghi cre nta
Paralog 2 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_020404227.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_020404227.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_020404227.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103647916
zma-r.6
for
103647916
sbi-r.1
for
8063285
osa-u.5
for
4350065
tae-r.2
for
123086543
tae-r.2
for
123096352
hvu-r.1
for
123447883
bdi-r.1
for
100831064
gma-u.5
for
100812370
mtr-u.5
for
25488485


Ortholog ID: 14445
Species zma sbi osa tae tae hvu bdi gma mtr
Symbol LOC103647916 LOC8063285 LOC4350065 LOC123086543 LOC123096352 LOC123447883 LOC100831064 LOC100812370 LOC25488485
Function* pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At3g46790, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g12770-like pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103647916 8063285 4350065 123086543 123096352 123447883 100831064 100812370 25488485
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