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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   541670   liguleless 2 
 zma-r.6   541670   liguleless 2 
 zma-m.5   541670   liguleless 2 
 zma-u.5   103636459   transcription factor LG2-like 
 sbi-r.1   8062354   transcription factor LG2 
 osa-u.5   4325063   transcription factor LG2-like 
 tae-r.2   123062673   transcription factor LG2 
 tae-r.2   123071491   transcription factor LG2 
 tae-r.2   123079824   transcription factor LG2 
 hvu-r.1   123444834   transcription factor LG2-like 
 bdi-r.1   100840197   transcription factor LG2 

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Top 50 coexpressed genes to 541670 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 541670 (zma-u.5 coexpression data)

CoexMap"541670"


zmaLOC541670 | Entrez gene ID : 541670      
Species zma sbi osa tae hvu bdi cre vvi bra ath ppo mtr nta bna gma cit sly ghi sot
Paralog 4 1 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma04075 [list] [network] Plant hormone signal transduction (537 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (326 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (823 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
Protein NP_001104893.1 [sequence] [blastp]
XP_008673407.1 [sequence] [blastp]
XP_008673408.1 [sequence] [blastp]
XP_008673409.1 [sequence] [blastp]
XP_008673410.1 [sequence] [blastp]
XP_035821978.1 [sequence] [blastp]
XP_035821979.1 [sequence] [blastp]
XP_035821980.1 [sequence] [blastp]
XP_035821981.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001104893.1)
nucl 6,  cyto 1,  mito 1,  plas 1,  E.R. 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for XP_008673407.1)
nucl 6,  cyto 1,  mito 1,  plas 1,  E.R. 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for XP_008673408.1)
nucl 6,  cyto 1,  mito 1,  plas 1,  E.R. 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for XP_008673409.1)
nucl 5,  cyto 3,  nucl_plas 3  (predict for XP_008673410.1)
nucl 6,  cyto 1,  mito 1,  plas 1,  E.R. 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for XP_035821978.1)
nucl 9,  cyto 1  (predict for XP_035821979.1)
nucl 9,  cyto 1  (predict for XP_035821980.1)
nucl 9,  cyto 1  (predict for XP_035821981.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001104893.1)
other 3  (predict for XP_008673407.1)
other 3  (predict for XP_008673408.1)
other 3  (predict for XP_008673409.1)
other 3  (predict for XP_008673410.1)
other 3  (predict for XP_035821978.1)
other 5,  mito 4  (predict for XP_035821979.1)
other 5,  mito 4  (predict for XP_035821980.1)
other 5,  mito 4  (predict for XP_035821981.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
541670
zma-r.6
for
541670
zma-m.5
for
541670
zma-u.5
for
103636459
sbi-r.1
for
8062354
osa-u.5
for
4325063
tae-r.2
for
123062673
tae-r.2
for
123071491
tae-r.2
for
123079824
hvu-r.1
for
123444834
bdi-r.1
for
100840197


Ortholog ID: 16205
Species zma zma sbi osa tae tae tae hvu bdi
Symbol LOC541670 LOC103636459 LOC8062354 LOC4325063 LOC123062673 LOC123071491 LOC123079824 LOC123444834 LOC100840197
Function* liguleless 2 transcription factor LG2-like transcription factor LG2 transcription factor LG2-like transcription factor LG2 transcription factor LG2 transcription factor LG2 transcription factor LG2-like transcription factor LG2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae04075 Plant hormone signal transduction 3
tae04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 541670 103636459 8062354 4325063 123062673 123071491 123079824 123444834 100840197
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