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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   541998   auxin import carrier 1 
 zma-r.6   541998   auxin import carrier 1 
 zma-m.5   541998   auxin import carrier 1 
 zma-u.5   103654551   auxin transporter-like protein 3 
 zma-u.5   100285200   uncharacterized LOC100285200 
 zma-u.5   100284071   uncharacterized LOC100284071 
 sbi-r.1   8072513   auxin transporter-like protein 2 
 sbi-r.1   8070688   auxin transporter-like protein 3 
 sbi-r.1   8054354   auxin transporter-like protein 2 
 osa-u.5   4324749   auxin transporter-like protein 1 
 osa-u.5   4332229   auxin transporter-like protein 3 
 osa-u.5   4338948   auxin transporter-like protein 2 
 tae-r.2   123071464   auxin transporter-like protein 1 
 tae-r.2   123062642   auxin transporter-like protein 1 
 tae-r.2   123085185   auxin transporter-like protein 2 
 hvu-r.1   123449170   auxin transporter-like protein 2 
 hvu-r.1   123446182   putative auxin transporter-like protein 4 
 hvu-r.1   123445956   auxin transporter-like protein 2 
 bdi-r.1   100840134   auxin transporter-like protein 3 
 bdi-r.1   100835087   auxin transporter-like protein 1 
 bdi-r.1   100821781   auxin transporter-like protein 3 
 ath-u.5   LAX2   uncharacterized protein 
 ath-u.5   AUX1   Transmembrane amino acid transporter family protein 
 ath-u.5   LAX1   uncharacterized protein 
 gma-u.5   LAX10   auxin transporter-like protein 10 
 gma-u.5   LAX14   auxin transporter-like protein 14 
 gma-u.5   LAX5   auxin transporter-like protein 5 
 sly-u.5   LAX1   auxin transporter-like protein 1 
 sly-u.5   LAX3   auxin transporter-like protein 3 
 sly-u.5   LAX2   auxin transporter-like protein 2 
 bra-r.6   103865653   auxin transporter protein 1 
 bra-r.6   103858403   auxin transporter-like protein 2 
 vvi-u.5   100267240   auxin transporter-like protein 2 
 vvi-u.5   100233126   auxin transporter-like protein 2 
 vvi-u.5   100253820   auxin transporter-like protein 2 
 ppo-u.5   7466059   auxin transporter-like protein 2 
 ppo-u.5   7470387   auxin transporter-like protein 5 
 ppo-u.5   7472133   auxin transporter-like protein 5 
 mtr-u.5   11406709   auxin transporter-like protein 1 
 mtr-u.5   11411395   auxin transporter-like protein 3 
 mtr-u.5   11407085   auxin transporter-like protein 2 
 ghi-r.1   107890973   auxin transporter-like protein 2 
 ghi-r.1   107891563   auxin transporter-like protein 2 
 ghi-r.1   107899523   auxin transporter-like protein 2 
 bna-r.1   125604156   auxin transporter-like protein 3 
 bna-r.1   106435878   auxin transporter-like protein 1 
 bna-r.1   106429411   auxin transporter-like protein 2 
 sot-r.1   102587153   auxin transporter-like protein 2 
 sot-r.1   102584729   auxin transporter-like protein 3 
 sot-r.1   102586608   auxin transporter-like protein 4 
 cit-r.1   102616273   auxin transporter-like protein 3 
 cit-r.1   102613492   auxin transporter-like protein 2 
 cit-r.1   102611910   auxin transporter-like protein 5 
 nta-r.1   107818122   auxin transporter-like protein 2 
 nta-r.1   107816434   auxin transporter-like protein 2 
 nta-r.1   107810165   auxin transporter-like protein 2 

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Top 50 coexpressed genes to 541998 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 541998 (zma-u.5 coexpression data)

CoexMap"541998"


zmaLOC541998 | Entrez gene ID : 541998    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 6 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma04075 [list] [network] Plant hormone signal transduction (537 genes)
GO BP
GO CC
GO MF
Protein NP_001105117.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  chlo 2,  pero 2,  mito_plas 2  (predict for NP_001105117.2)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001105117.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
541998
zma-r.6
for
541998
zma-m.5
for
541998
zma-u.5
for
103654551
zma-u.5
for
100285200
zma-u.5
for
100284071
sbi-r.1
for
8072513
sbi-r.1
for
8070688
sbi-r.1
for
8054354
osa-u.5
for
4324749
osa-u.5
for
4332229
osa-u.5
for
4338948
tae-r.2
for
123071464
tae-r.2
for
123062642
tae-r.2
for
123085185
hvu-r.1
for
123449170
hvu-r.1
for
123446182
hvu-r.1
for
123445956
bdi-r.1
for
100840134
bdi-r.1
for
100835087
bdi-r.1
for
100821781
ath-u.5
for
LAX2
ath-u.5
for
AUX1
ath-u.5
for
LAX1
gma-u.5
for
LAX10
gma-u.5
for
LAX14
gma-u.5
for
LAX5
sly-u.5
for
LAX1
sly-u.5
for
LAX3
sly-u.5
for
LAX2
bra-r.6
for
103865653
bra-r.6
for
103858403
vvi-u.5
for
100267240
vvi-u.5
for
100233126
vvi-u.5
for
100253820
ppo-u.5
for
7466059
ppo-u.5
for
7470387
ppo-u.5
for
7472133
mtr-u.5
for
11406709
mtr-u.5
for
11411395
mtr-u.5
for
11407085
ghi-r.1
for
107890973
ghi-r.1
for
107891563
ghi-r.1
for
107899523
bna-r.1
for
125604156
bna-r.1
for
106435878
bna-r.1
for
106429411
sot-r.1
for
102587153
sot-r.1
for
102584729
sot-r.1
for
102586608
cit-r.1
for
102616273
cit-r.1
for
102613492
cit-r.1
for
102611910
nta-r.1
for
107818122
nta-r.1
for
107816434
nta-r.1
for
107810165


Ortholog ID: 424
Species zma zma zma sbi sbi sbi osa osa osa tae tae tae hvu hvu hvu bdi bdi bdi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta
Symbol LOC541998 LOC103654551 LOC100285200 LOC8072513 LOC8070688 LOC8054354 LOC4324749 LOC4338948 LOC4349885 LOC123058218 LOC123190274 LOC123180334 LOC123449170 LOC123444861 LOC123420710 LOC100840134 LOC100835087 LOC100821781 LAX2 LAX1 LAX3 LAX1 LAX2 LAX15 LAX1 LAX2 LAX5 LOC103842560 LOC103830556 AUX1 LOC100233126 LOC100253820 LOC100243769 LOC7472133 LOC7488012 LOC7490334 LOC11406709 LOC25492791 LOC25494399 LOC107890973 LOC107930145 LOC107958047 LOC106397731 LOC106389509 LOC106368803 LOC102587153 LOC102590583 LOC102597205 LOC102616273 LOC102611910 LOC102619221 LOC107819848 LOC107782481 LOC107796536
Function* auxin import carrier 1 auxin transporter-like protein 3 uncharacterized LOC100285200 auxin transporter-like protein 2 auxin transporter-like protein 3 auxin transporter-like protein 2 auxin transporter-like protein 1 auxin transporter-like protein 2 putative auxin transporter-like protein 4 auxin transporter-like protein 2 auxin transporter-like protein 3 auxin transporter-like protein 3 auxin transporter-like protein 2 auxin transporter-like protein 1 auxin transporter-like protein 3 auxin transporter-like protein 3 auxin transporter-like protein 1 auxin transporter-like protein 3 uncharacterized protein uncharacterized protein uncharacterized protein auxin transporter-like protein 1 auxin transporter-like protein 2 auxin transporter-like protein 15 auxin transporter-like protein 1 auxin transporter-like protein 2 auxin transporter-like protein 5 auxin transporter-like protein 2 auxin transporter-like protein 3 auxin transporter protein 1 auxin transporter-like protein 2 auxin transporter-like protein 2 auxin transporter-like protein 3 auxin transporter-like protein 5 auxin transporter-like protein 1 auxin transporter-like protein 2 auxin transporter-like protein 1 auxin transporter-like protein 5 auxin transporter-like protein 4 auxin transporter-like protein 2 auxin transporter-like protein 2 auxin transporter-like protein 2 auxin transporter-like protein 3 auxin transporter-like protein 2 auxin transporter-like protein 2 auxin transporter-like protein 2 auxin transporter-like protein 5 auxin transporter-like protein 2 auxin transporter-like protein 3 auxin transporter-like protein 5 auxin transporter-like protein 2 auxin transporter-like protein 2 auxin transporter-like protein 4 auxin transporter-like protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 6
sbi00010 Glycolysis / Gluconeogenesis 3
sbi00620 Pyruvate metabolism 3
sbi00071 Fatty acid degradation 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 5
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00710 Carbon fixation by Calvin cycle 2
mtr02010 ABC transporters 2
mtr00071 Fatty acid degradation 2
mtr01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
nta03008 Ribosome biogenesis in eukaryotes 3
nta03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 541998 103654551 100285200 8072513 8070688 8054354 4324749 4338948 4349885 123058218 123190274 123180334 123449170 123444861 123420710 100840134 100835087 100821781 816640 831866 844105 100778756 100778259 100810532 100736540 100736477 100736541 103842560 103830556 103867136 100233126 100253820 100243769 7472133 7488012 7490334 11406709 25492791 25494399 107890973 107930145 107958047 106397731 106389509 106368803 102587153 102590583 102597205 102616273 102611910 102619221 107819848 107782481 107796536
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