Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542318   sugary 1 
 zma-r.6   542318   sugary 1 
 zma-m.5   542318   sugary 1 
 sbi-r.1   8081346   isoamylase 1, chloroplastic 
 osa-u.5   4346068   isoamylase 1, chloroplastic-like 
 tae-r.2   123151415   isoamylase 1, chloroplastic 
 tae-r.2   123164512   isoamylase 1, chloroplastic 
 tae-r.2   542884   isoamylase 
 hvu-r.1   123407337   isoamylase 1, chloroplastic 
 bdi-r.1   100845703   isoamylase 1, chloroplastic 
 ath-u.5   ISA1   isoamylase 1 
 gma-u.5   100792587   isoamylase 1, chloroplastic 
 sly-u.5   101249741   isoamylase 1, chloroplastic 
 bra-r.6   103866998   isoamylase 1, chloroplastic 
 vvi-u.5   100261768   isoamylase 1, chloroplastic 
 ppo-u.5   7485483   isoamylase 1, chloroplastic 
 ppo-u.5   7490462   isoamylase 1, chloroplastic 
 mtr-u.5   11428998   isoamylase 1, chloroplastic 
 ghi-r.1   107931589   isoamylase 1, chloroplastic 
 ghi-r.1   107904305   isoamylase 1, chloroplastic 
 bna-r.1   106396428   isoamylase 1, chloroplastic 
 bna-r.1   106450816   isoamylase 1, chloroplastic 
 sot-r.1   102577466   isoamylase 
 cit-r.1   102616774   isoamylase 1, chloroplastic 
 nta-r.1   107760677   isoamylase 1, chloroplastic-like 
 nta-r.1   107778772   isoamylase 1, chloroplastic 
 cre-r.1   CHLRE_03g155001v5   uncharacterized protein 

close


Top 50 coexpressed genes to 542318 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 542318 (zma-u.5 coexpression data)

CoexMap"542318"


zmaLOC542318 | Entrez gene ID : 542318      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 1 1 1 1 2 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma00500 [list] [network] Starch and sucrose metabolism (180 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (898 genes)  IEA  
GO CC
GO MF
GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds  (428 genes)  IEA  
Protein XP_008678357.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_008678357.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_008678357.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542318
zma-r.6
for
542318
zma-m.5
for
542318
sbi-r.1
for
8081346
osa-u.5
for
4346068
tae-r.2
for
123151415
tae-r.2
for
123164512
tae-r.2
for
542884
hvu-r.1
for
123407337
bdi-r.1
for
100845703
ath-u.5
for
ISA1
gma-u.5
for
100792587
sly-u.5
for
101249741
bra-r.6
for
103866998
vvi-u.5
for
100261768
ppo-u.5
for
7485483
ppo-u.5
for
7490462
mtr-u.5
for
11428998
ghi-r.1
for
107931589
ghi-r.1
for
107904305
bna-r.1
for
106396428
bna-r.1
for
106450816
sot-r.1
for
102577466
cit-r.1
for
102616774
nta-r.1
for
107760677
nta-r.1
for
107778772
cre-r.1
for
CHLRE_03g155001v5


Ortholog ID: 9427
Species zma sbi osa tae tae tae hvu bdi ath gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC542318 LOC8081346 LOC4346068 LOC123151415 LOC123164512 LOC542884 LOC123407337 LOC100845703 ISA1 LOC100792587 LOC101249741 LOC103866998 LOC100261768 LOC7485483 LOC7490462 LOC11428998 LOC107931589 LOC107904305 LOC106396428 LOC106450816 LOC102577466 LOC102616774 LOC107760677 LOC107778772 CHLRE_03g155001v5
Function* sugary 1 isoamylase 1, chloroplastic isoamylase 1, chloroplastic-like isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1 isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase 1, chloroplastic isoamylase isoamylase 1, chloroplastic isoamylase 1, chloroplastic-like isoamylase 1, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 10
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 14
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 15
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 15
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 15
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 11
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00500 Starch and sucrose metabolism 4
gma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 5
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 5
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 15
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 15
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 10
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 7
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 7
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542318 8081346 4346068 123151415 123164512 542884 123407337 100845703 818580 100792587 101249741 103866998 100261768 7485483 7490462 11428998 107931589 107904305 106396428 106450816 102577466 102616774 107760677 107778772 5723075
The preparation time of this page was 0.2 [sec].