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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   542375   opaque endosperm 2 
 zma-r.6   542375   opaque endosperm 2 
 zma-m.5   542375   opaque endosperm 2 
 sbi-r.1   8060745   regulatory protein opaque-2 
 sbi-r.1   8060747   regulatory protein opaque-2 

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Top 50 coexpressed genes to 542375 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542375 (zma-u.5 coexpression data)

CoexMap"542375"


zmaLOC542375 | Entrez gene ID : 542375      
Species zma sbi cre vvi ath ppo mtr hvu bna tae osa gma sly ghi cit bra nta bdi sot
Paralog 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1355 genes)  IEA  
Protein NP_001105421.2 [sequence] [blastp]
XP_008651859.1 [sequence] [blastp]
XP_035816663.1 [sequence] [blastp]
XP_035816665.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001105421.2)
pero 4,  chlo 3,  nucl 1,  vacu 1,  chlo_mito 1  (predict for XP_008651859.1)
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_035816663.1)
nucl 9  (predict for XP_035816665.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001105421.2)
scret 5,  other 3  (predict for XP_008651859.1)
other 7  (predict for XP_035816663.1)
other 8  (predict for XP_035816665.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
542375
zma-r.6
for
542375
zma-m.5
for
542375
sbi-r.1
for
8060745
sbi-r.1
for
8060747


Ortholog ID: 29032
Species zma sbi sbi
Symbol LOC542375 LOC8060745 LOC8060747
Function* opaque endosperm 2 regulatory protein opaque-2 regulatory protein opaque-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma00380 Tryptophan metabolism 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542375 8060745 8060747
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