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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   606438   Protein CUP-SHAPED COTYLEDON 3 
 zma-r.6   606438   Protein CUP-SHAPED COTYLEDON 3 
 zma-m.5   606438   Protein CUP-SHAPED COTYLEDON 3 
 sbi-r.1   8064020   protein CUP-SHAPED COTYLEDON 3 
 osa-u.5   4346008   protein CUP-SHAPED COTYLEDON 3 
 ghi-r.1   107905749   protein CUP-SHAPED COTYLEDON 3 
 ghi-r.1   107921388   protein CUP-SHAPED COTYLEDON 3-like 
 ghi-r.1   107917103   protein CUP-SHAPED COTYLEDON 3 

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Top 50 coexpressed genes to 606438 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 606438 (zma-u.5 coexpression data)

CoexMap"606438"


zmaLOC606438 | Entrez gene ID : 606438      
Species zma sbi osa ghi cre vvi bra ath ppo mtr hvu bna tae nta bdi gma sly cit sot
Paralog 3 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1994 genes)  IEA  
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (2288 genes)  IEA  
Protein XP_008663646.1 [sequence] [blastp]
XP_008663651.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  pero 2,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_008663646.1)
chlo 3,  mito 3,  pero 3,  chlo_mito 3  (predict for XP_008663651.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_008663646.1)
mito 9  (predict for XP_008663651.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
606438
zma-r.6
for
606438
zma-m.5
for
606438
sbi-r.1
for
8064020
osa-u.5
for
4346008
ghi-r.1
for
107905749
ghi-r.1
for
107921388
ghi-r.1
for
107917103


Ortholog ID: 8773
Species zma sbi osa ghi ghi ghi
Symbol LOC606438 LOC8064020 LOC4346008 LOC107905749 LOC107917103 LOC107905712
Function* Protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi00280 Valine, leucine and isoleucine degradation 3
sbi00410 beta-Alanine metabolism 3
sbi00640 Propanoate metabolism 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 606438 8064020 4346008 107905749 107917103 107905712
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