ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	clpP	ATP-dependent Clp protease proteolytic subunit
zma-r.6	clpP	ATP-dependent Clp protease proteolytic subunit
sbi-r.1	clpP	ATP-dependent Clp protease proteolytic subunit
osa-u.5	clpP	ATP-dependent Clp protease proteolytic subunit
bdi-r.1	clpP	ATP-dependent Clp protease proteolytic subunit
ath-u.5	clpP	ATP-dependent Clp protease proteolytic subunit
gma-u.5	clpP	ATP-dependent Clp protease proteolytic subunit
sly-u.5	clpP	clp protease proteolytic subunit
vvi-u.5	clpP	ATP-dependent Clp protease proteolytic subunit
ppo-u.5	clpP	ATP-dependent Clp protease proteolytic subunit
mtr-u.5	120580179	ATP-dependent Clp protease proteolytic subunit
mtr-u.5	11441954	ATP-dependent Clp protease proteolytic subunit
mtr-u.5	clpP	ATP-dependent Clp protease proteolytic subunit
ghi-r.1	121220860	ATP-dependent Clp protease proteolytic subunit
ghi-r.1	clpP	ATP-dependent Clp protease proteolytic subunit
bna-r.1	clpP	ATP-dependent Clp protease proteolytic subunit
sot-r.1	clpP	ATP-dependent Clp protease proteolytic subunit
cit-r.1	clpP	ATP-dependent Clp protease proteolytic subunit
nta-r.1	clpP	ATP-dependent Clp protease proteolytic subunit

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_043048.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, plas 3, cyto 1, nucl_plas 1, golg_plas 1, cysk_plas 1

(predict for NP_043048.1)

Subcellular
localization
TargetP

other 8

(predict for NP_043048.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for clpP	zma-r.6 for clpP	sbi-r.1 for clpP	osa-u.5 for clpP	bdi-r.1 for clpP	ath-u.5 for clpP	gma-u.5 for clpP	sly-u.5 for clpP	vvi-u.5 for clpP	ppo-u.5 for clpP	mtr-u.5 for 120580179	mtr-u.5 for 11441954	mtr-u.5 for clpP	ghi-r.1 for 121220860	ghi-r.1 for clpP	bna-r.1 for clpP	sot-r.1 for clpP	cit-r.1 for clpP	nta-r.1 for clpP

Ortholog

Ortholog ID: 11813

Species

zma

sbi

osa

bdi

ath

gma

sly

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

clpP

LOC120580179

LOC11441954

clpP

LOC121220860

clpP

Function^*

ATP-dependent Clp protease proteolytic subunit

clp protease proteolytic subunit

ATP-dependent Clp protease proteolytic subunit

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	8
bdi03010	Ribosome	6
bdi00195	Photosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma03020	RNA polymerase	4
gma00970	Aminoacyl-tRNA biosynthesis	3
gma00195	Photosynthesis	2
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	8
sly00970	Aminoacyl-tRNA biosynthesis	4
sly00190	Oxidative phosphorylation	2
sly00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	7
vvi00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	8
ppo00970	Aminoacyl-tRNA biosynthesis	3
ppo03020	RNA polymerase	3
ppo00190	Oxidative phosphorylation	2
ppo00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	8
mtr00970	Aminoacyl-tRNA biosynthesis	2
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	4
mtr00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	11
mtr00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	10
ghi00195	Photosynthesis	10
ghi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	9
ghi03010	Ribosome	4
ghi00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	12
bna03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	8
sot00190	Oxidative phosphorylation	4
sot00195	Photosynthesis	4
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	10
cit00190	Oxidative phosphorylation	6
cit01200	Carbon metabolism	3
cit00970	Aminoacyl-tRNA biosynthesis	2
cit00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00190	Oxidative phosphorylation	2
nta00195	Photosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

845176

4549216

3131474

6439882

844734

3989322

3950455

4025124

4929698

120580179

11441954

5333172

121220860

3989129

11541989

4099934

4271124

800474

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to clpP (zma-u.5 coexpression data)

Top 50 enrichment test to clpP (zma-u.5 coexpression data)


Species	zma	sbi	osa	bdi	ath	gma	sly	vvi	ppo	mtr	ghi	bna	sot	cit	nta	bra	tae	cre	hvu
Paralog	2	1	1	1	1	1	1	1	1	3	2	1	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to clpP (zma-u.5 coexpression data)

Top 50 enrichment test to clpP (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**