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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   rps18   ribosomal protein S18 
 zma-r.6   rps18   ribosomal protein S18 
 sbi-r.1   rps18   ribosomal protein S18 
 osa-u.5   rps18   ribosomal protein S18 
 tae-r.2   123181335   30S ribosomal protein S18, chloroplastic 
 tae-r.2   123055164   30S ribosomal protein S18, chloroplastic 
 hvu-r.1   123422472   30S ribosomal protein S18, chloroplastic 
 hvu-r.1   123421455   30S ribosomal protein S18, chloroplastic 
 hvu-r.1   123421240   30S ribosomal protein S18, chloroplastic 
 bdi-r.1   rps18   ribosomal protein S18 
 ath-u.5   rps18   ribosomal protein S18 
 gma-u.5   rps18   30S ribosomal protein S18 
 sly-u.5   rps18   ribosomal protein S18 
 vvi-u.5   rps18   30S ribosomal protein S18 
 vvi-u.5   rps18   ribosomal protein S18 
 ppo-u.5   rps18   ribosomal protein S18 
 mtr-u.5   rps18   ribosomal protein S18 
 ghi-r.1   rps18   30S ribosomal protein S18 
 bna-r.1   rps18   ribosomal protein S18 
 sot-r.1   rps18   ribosomal protein S18 
 cit-r.1   rps18   ribosomal protein S18 
 nta-r.1   rps18   30S ribosomal protein S18 

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Top 50 coexpressed genes to rps18 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to rps18 (zma-u.5 coexpression data)

CoexMap"845233"


zmarps18 | Entrez gene ID : 845233      
Species zma sbi osa tae hvu bdi ath gma sly vvi ppo mtr ghi bna sot cit nta bra cre
Paralog 2 1 1 2 3 1 1 1 1 2 1 1 1 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03010 [list] [network] Ribosome (2925 genes)
GO BP
GO CC
GO MF
Protein NP_043046.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 2,  cyto_nucl 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_043046.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for NP_043046.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
rps18
zma-r.6
for
rps18
sbi-r.1
for
rps18
osa-u.5
for
rps18
tae-r.2
for
123181335
tae-r.2
for
123055164
hvu-r.1
for
123422472
hvu-r.1
for
123421455
hvu-r.1
for
123421240
bdi-r.1
for
rps18
ath-u.5
for
rps18
gma-u.5
for
rps18
sly-u.5
for
rps18
vvi-u.5
for
rps18
vvi-u.5
for
rps18
ppo-u.5
for
rps18
mtr-u.5
for
rps18
ghi-r.1
for
rps18
bna-r.1
for
rps18
sot-r.1
for
rps18
cit-r.1
for
rps18
nta-r.1
for
rps18


Ortholog ID: 3403
Species zma sbi osa tae tae hvu hvu bdi ath gma sly vvi vvi ppo mtr ghi bna sot cit nta
Symbol rps18 rps18 rps18 LOC123181335 LOC123055164 LOC123422472 LOC123421455 rps18 rps18 rps18 rps18 rps18 rps18 rps18 rps18 rps18 rps18 rps18 rps18 rps18
Function* ribosomal protein S18 ribosomal protein S18 ribosomal protein S18 30S ribosomal protein S18, chloroplastic 30S ribosomal protein S18, chloroplastic 30S ribosomal protein S18, chloroplastic 30S ribosomal protein S18, chloroplastic ribosomal protein S18 ribosomal protein S18 30S ribosomal protein S18 ribosomal protein S18 30S ribosomal protein S18 ribosomal protein S18 ribosomal protein S18 ribosomal protein S18 30S ribosomal protein S18 ribosomal protein S18 ribosomal protein S18 ribosomal protein S18 30S ribosomal protein S18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 5
zma03010 Ribosome 3
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi03020 RNA polymerase 4
sbi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
osa00190 Oxidative phosphorylation 4
osa00195 Photosynthesis 3
osa03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 12
tae00195 Photosynthesis 9
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 12
tae00195 Photosynthesis 9
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
hvu00190 Oxidative phosphorylation 5
hvu00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu00195 Photosynthesis 8
hvu00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
ath00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma00195 Photosynthesis 5
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00190 Oxidative phosphorylation 3
sly00195 Photosynthesis 3
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi00190 Oxidative phosphorylation 4
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi00190 Oxidative phosphorylation 4
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo00190 Oxidative phosphorylation 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00190 Oxidative phosphorylation 4
ghi00195 Photosynthesis 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 12
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot00190 Oxidative phosphorylation 6
sot00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit00970 Aminoacyl-tRNA biosynthesis 4
cit00190 Oxidative phosphorylation 3
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 845233 4549213 3131440 123181335 123055164 123422472 123421455 6439775 844736 3989320 3950409 4025061 7498604 4929694 5333099 3989127 11542025 4099868 4271122 800476
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