ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100824312	germin-like protein 8-14
bdi-r.1	100824617	germin-like protein 8-14
tae-r.2	123152637	germin-like protein 8-14
tae-r.2	123043461	germin-like protein 8-14
tae-r.2	123048523	germin-like protein 8-14
hvu-r.1	123412900	germin-like protein 8-14
hvu-r.1	123429324	germin-like protein 8-14
osa-u.5	4345763	germin-like protein 8-14
zma-u.5	100272933	germin-like protein
sbi-r.1	8071226	germin-like protein 8-14
ath-u.5	GER3	germin 3
gma-u.5	GER10	germin-like protein
gma-u.5	100800387	germin-like protein
gma-u.5	GER8	germin-like protein
sly-u.5	101254918	auxin-binding protein ABP19a
sly-u.5	101250583	auxin-binding protein ABP19a
bra-r.6	103845660	germin-like protein 1
bra-r.6	103851361	germin-like protein subfamily 3 member 3
bra-r.6	103851362	germin-like protein 1
vvi-u.5	100266519	auxin-binding protein ABP19a
ppo-u.5	18100345	auxin-binding protein ABP19a
ppo-u.5	112326879	auxin-binding protein ABP19a
ppo-u.5	7490946	auxin-binding protein ABP19a
mtr-u.5	25486501	auxin-binding protein ABP19a
mtr-u.5	11429465	germin-like protein subfamily 3 member 1
mtr-u.5	11419921	auxin-binding protein ABP19b
ghi-r.1	107891727	germin-like protein subfamily 3 member 1
ghi-r.1	107907103	germin-like protein
bna-r.1	106425748	germin-like protein subfamily 3 member 3
bna-r.1	106386997	germin-like protein subfamily 3 member 3
bna-r.1	106353773	germin-like protein 1
sot-r.1	102587114	auxin-binding protein ABP19a
sot-r.1	102594953	auxin-binding protein ABP19a-like
sot-r.1	102602789	auxin-binding protein ABP19a-like
cit-r.1	102627199	germin-like protein subfamily 3 member 1
nta-r.1	107773727	auxin-binding protein ABP19a-like
nta-r.1	107781399	auxin-binding protein ABP19a
nta-r.1	107770478	auxin-binding protein ABP19a-like

Top 50 coexpressed genes to 100824312 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100824312 (bdi-r.1 coexpression data)

CoexMap"100824312"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005618 [list] [network] cell wall

(156 genes)

IEA

GO MF

GO:0030145 [list] [network] manganese ion binding

(48 genes)

IEA

Protein

XP_003574592.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, chlo 2, vacu 2, mito 1, E.R. 1

(predict for XP_003574592.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_003574592.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100824312	bdi-r.1 for 100824617	tae-r.2 for 123152637	tae-r.2 for 123043461	tae-r.2 for 123048523	hvu-r.1 for 123412900	hvu-r.1 for 123429324	osa-u.5 for 4345763	zma-u.5 for 100272933	sbi-r.1 for 8071226	ath-u.5 for GER3	gma-u.5 for GER10	gma-u.5 for 100800387	gma-u.5 for GER8	sly-u.5 for 101254918	sly-u.5 for 101250583	bra-r.6 for 103845660	bra-r.6 for 103851361	bra-r.6 for 103851362	vvi-u.5 for 100266519	ppo-u.5 for 18100345	ppo-u.5 for 112326879	ppo-u.5 for 7490946	mtr-u.5 for 25486501	mtr-u.5 for 11429465	mtr-u.5 for 11419921	ghi-r.1 for 107891727	ghi-r.1 for 107907103	bna-r.1 for 106425748	bna-r.1 for 106386997	bna-r.1 for 106353773	sot-r.1 for 102587114	sot-r.1 for 102594953	sot-r.1 for 102602789	cit-r.1 for 102627199	nta-r.1 for 107773727	nta-r.1 for 107781399	nta-r.1 for 107770478

Ortholog

Ortholog ID: 1473

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

GER3

GER10

GER8

Function^*

germin-like protein 8-14

germin-like protein

germin-like protein 8-14

germin 3

germin-like protein

auxin-binding protein ABP19a

germin-like protein 1

germin-like protein subfamily 3 member 3

germin-like protein 1

auxin-binding protein ABP19a

germin-like protein subfamily 3 member 1

auxin-binding protein ABP19b

germin-like protein subfamily 3 member 1

auxin-binding protein ABP19a

germin-like protein 1

germin-like protein subfamily 3 member 3

auxin-binding protein ABP19a

auxin-binding protein ABP19a-like

germin-like protein subfamily 3 member 1

auxin-binding protein ABP19a-like

auxin-binding protein ABP19a

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	5
tae00710	Carbon fixation by Calvin cycle	5
tae01200	Carbon metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	5
tae00710	Carbon fixation by Calvin cycle	5
tae01200	Carbon metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	11
tae00710	Carbon fixation by Calvin cycle	11
tae01200	Carbon metabolism	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00710	Carbon fixation by Calvin cycle	7
hvu01200	Carbon metabolism	7
hvu00630	Glyoxylate and dicarboxylate metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00460	Cyanoamino acid metabolism	2
zma00500	Starch and sucrose metabolism	2
zma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00710	Carbon fixation by Calvin cycle	3
bra01200	Carbon metabolism	3
bra00010	Glycolysis / Gluconeogenesis	2
bra00030	Pentose phosphate pathway	2
bra00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00902	Monoterpenoid biosynthesis	5
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	8
ghi01200	Carbon metabolism	4
ghi00710	Carbon fixation by Calvin cycle	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	2
cit04517	IgSF CAM signaling	2
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2
nta00261	Monobactam biosynthesis	2
nta00450	Selenocompound metabolism	2
nta00920	Sulfur metabolism	2
nta01320	Sulfur cycle	2

Expression

Expression pattern

Entrez Gene ID^*

100824312

100824617

542989

123051322

123187274

123412900

123429324

4345763

100272933

8071226

832185

100806553

100800387

100500326

101254918

101250583

103845660

103856454

103830785

100266519

18100345

112326879

7490946

25486501

11429465

11419921

107891727

107958787

106405935

106406175

106434866

102587114

102594953

102602789

102627199

107773727

107781399

107784278

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	1	1	1	1	3	2	3	1	3	3	2	3	3	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100824312 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100824312 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**