ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100826596	nucleobase-ascorbate transporter 3
bdi-r.1	100845314	nucleobase-ascorbate transporter 2
bdi-r.1	100846759	nucleobase-ascorbate transporter 2
bdi-r.1	100824290	nucleobase-ascorbate transporter 2
tae-r.2	123062117	nucleobase-ascorbate transporter 2
tae-r.2	123070842	nucleobase-ascorbate transporter 2
tae-r.2	123079234	nucleobase-ascorbate transporter 2
hvu-r.1	123395562	nucleobase-ascorbate transporter 2-like
hvu-r.1	123397586	nucleobase-ascorbate transporter 3
hvu-r.1	123444457	nucleobase-ascorbate transporter 2-like
osa-u.5	4325616	nucleobase-ascorbate transporter 2
osa-u.5	4345399	nucleobase-ascorbate transporter 2
osa-u.5	4346706	nucleobase-ascorbate transporter 2
zma-u.5	103652969	nucleobase-ascorbate transporter 2
zma-u.5	100285674	solute carrier family 23 member 2
zma-u.5	100279209	uncharacterized LOC100279209
sbi-r.1	110429765	nucleobase-ascorbate transporter 3
sbi-r.1	110433204	nucleobase-ascorbate transporter 2-like
sbi-r.1	8070380	nucleobase-ascorbate transporter 2
ath-u.5	AT2G05760	Xanthine/uracil permease family protein
ath-u.5	PDE135	Xanthine/uracil permease family protein
ath-u.5	AT2G34190	Xanthine/uracil permease family protein
gma-u.5	100815258	nucleobase-ascorbate transporter 3
gma-u.5	100812256	nucleobase-ascorbate transporter 2
gma-u.5	100795365	nucleobase-ascorbate transporter 2
sly-u.5	101244014	nucleobase-ascorbate transporter 1
sly-u.5	101244150	nucleobase-ascorbate transporter 2
sly-u.5	101264718	nucleobase-ascorbate transporter 3
bra-r.6	103858356	nucleobase-ascorbate transporter 3
bra-r.6	103860342	nucleobase-ascorbate transporter 1
vvi-u.5	100249876	nucleobase-ascorbate transporter 1
vvi-u.5	100262591	nucleobase-ascorbate transporter 3
vvi-u.5	100244635	nucleobase-ascorbate transporter 2
ppo-u.5	7470202	nucleobase-ascorbate transporter 2
ppo-u.5	7455900	nucleobase-ascorbate transporter 2
mtr-u.5	11414248	nucleobase-ascorbate transporter 3
mtr-u.5	11415893	nucleobase-ascorbate transporter 2
mtr-u.5	11442203	nucleobase-ascorbate transporter 1
ghi-r.1	107913164	nucleobase-ascorbate transporter 2
ghi-r.1	107905821	nucleobase-ascorbate transporter 2
ghi-r.1	107912633	nucleobase-ascorbate transporter 1
bna-r.1	106439783	nucleobase-ascorbate transporter 1-like
bna-r.1	106433890	nucleobase-ascorbate transporter 2
bna-r.1	106447511	nucleobase-ascorbate transporter 2
sot-r.1	102584426	nucleobase-ascorbate transporter 3
sot-r.1	102604223	nucleobase-ascorbate transporter 2
sot-r.1	102605796	nucleobase-ascorbate transporter 1
cit-r.1	102607784	nucleobase-ascorbate transporter 2
cit-r.1	102615769	nucleobase-ascorbate transporter 1
cit-r.1	102628414	nucleobase-ascorbate transporter 3
nta-r.1	107803046	nucleobase-ascorbate transporter 1
nta-r.1	107804425	nucleobase-ascorbate transporter 2-like
nta-r.1	107792800	nucleobase-ascorbate transporter 3
cre-r.1	CHLRE_17g716800v5	uncharacterized protein

Top 50 coexpressed genes to 100826596 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100826596 (bdi-r.1 coexpression data)

CoexMap"100826596"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(852 genes)

IEA

GO CC

GO:0009506 [list] [network] plasmodesma	(120 genes)	IEA
GO:0005886 [list] [network] plasma membrane	(914 genes)	IEA

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(1078 genes)

IEA

Protein

XP_003578422.1 [sequence] [blastp]
XP_010237107.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, chlo 1, cyto 1	(predict for XP_003578422.1)
plas 6, chlo 1, cyto 1	(predict for XP_010237107.1)

Subcellular
localization
TargetP

other 8	(predict for XP_003578422.1)
other 8	(predict for XP_010237107.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100826596	bdi-r.1 for 100845314	bdi-r.1 for 100846759	bdi-r.1 for 100824290	tae-r.2 for 123062117	tae-r.2 for 123070842	tae-r.2 for 123079234	hvu-r.1 for 123395562	hvu-r.1 for 123397586	hvu-r.1 for 123444457	osa-u.5 for 4325616	osa-u.5 for 4345399	osa-u.5 for 4346706	zma-u.5 for 103652969	zma-u.5 for 100285674	zma-u.5 for 100279209	sbi-r.1 for 110429765	sbi-r.1 for 110433204	sbi-r.1 for 8070380	ath-u.5 for AT2G05760	ath-u.5 for PDE135	ath-u.5 for AT2G34190	gma-u.5 for 100815258	gma-u.5 for 100812256	gma-u.5 for 100795365	sly-u.5 for 101244014	sly-u.5 for 101244150	sly-u.5 for 101264718	bra-r.6 for 103858356	bra-r.6 for 103860342	vvi-u.5 for 100249876	vvi-u.5 for 100262591	vvi-u.5 for 100244635	ppo-u.5 for 7470202	ppo-u.5 for 7455900	mtr-u.5 for 11414248	mtr-u.5 for 11415893	mtr-u.5 for 11442203	ghi-r.1 for 107913164	ghi-r.1 for 107905821	ghi-r.1 for 107912633	bna-r.1 for 106439783	bna-r.1 for 106433890	bna-r.1 for 106447511	sot-r.1 for 102584426	sot-r.1 for 102604223	sot-r.1 for 102605796	cit-r.1 for 102607784	cit-r.1 for 102615769	cit-r.1 for 102628414	nta-r.1 for 107803046	nta-r.1 for 107804425	nta-r.1 for 107792800	cre-r.1 for CHLRE_17g716800v5

Ortholog

Ortholog ID: 1069

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

PDE135

Function^*