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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100827351   probable RNA 3'-terminal phosphate cyclase-like protein 
 bdi-r.1   100831928   probable RNA 3'-terminal phosphate cyclase-like protein 
 tae-r.2   123087779   probable RNA 3'-terminal phosphate cyclase-like protein 
 tae-r.2   123102512   probable RNA 3'-terminal phosphate cyclase-like protein 
 tae-r.2   123110650   probable RNA 3'-terminal phosphate cyclase-like protein 
 hvu-r.1   123394916   probable RNA 3'-terminal phosphate cyclase-like protein 
 osa-u.5   4334688   probable RNA 3'-terminal phosphate cyclase-like protein 
 zma-u.5   100191832   RNA 3-terminal phosphate cyclase-like protein 
 sbi-r.1   8063749   probable RNA 3'-terminal phosphate cyclase-like protein 
 ath-u.5   AT5G22100   RNA cyclase family protein 
 gma-u.5   100797356   probable RNA 3'-terminal phosphate cyclase-like protein 
 gma-u.5   100778883   probable RNA 3'-terminal phosphate cyclase-like protein-like 
 sly-u.5   101247688   probable RNA 3'-terminal phosphate cyclase-like protein 
 bra-r.6   103843917   probable RNA 3'-terminal phosphate cyclase-like protein 
 bra-r.6   103833060   probable RNA 3'-terminal phosphate cyclase-like protein 
 vvi-u.5   100247518   probable RNA 3'-terminal phosphate cyclase-like protein 
 ppo-u.5   7491124   probable RNA 3'-terminal phosphate cyclase-like protein 
 ppo-u.5   7475138   probable RNA 3'-terminal phosphate cyclase-like protein 
 mtr-u.5   25502079   probable RNA 3'-terminal phosphate cyclase-like protein 
 ghi-r.1   107889221   probable RNA 3'-terminal phosphate cyclase-like protein 
 ghi-r.1   107899878   probable RNA 3'-terminal phosphate cyclase-like protein 
 bna-r.1   106449690   probable RNA 3'-terminal phosphate cyclase-like protein 
 bna-r.1   106365737   probable RNA 3'-terminal phosphate cyclase-like protein 
 bna-r.1   111206781   probable RNA 3'-terminal phosphate cyclase-like protein 
 sot-r.1   102589355   probable RNA 3'-terminal phosphate cyclase-like protein 
 cit-r.1   102631349   probable RNA 3'-terminal phosphate cyclase-like protein 
 nta-r.1   107816483   putative RNA 3'-terminal phosphate cyclase-like protein 
 nta-r.1   107807500   putative RNA 3'-terminal phosphate cyclase-like protein 
 cre-r.1   CHLRE_09g400367v5   uncharacterized protein 

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Top 50 coexpressed genes to 100827351 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100827351 (bdi-r.1 coexpression data)

CoexMap"100827351"


bdiLOC100827351 | Entrez gene ID : 100827351      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 1 1 1 1 1 2 1 2 1 2 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03008 [list] [network] Ribosome biogenesis in eukaryotes (244 genes)
GO BP
GO:0000479 [list] [network] endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (13 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (277 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (178 genes)  IEA  
GO MF
GO:0004521 [list] [network] RNA endonuclease activity  (75 genes)  IEA  
Protein XP_003563039.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo_mito 5,  mito 5,  chlo 4,  cyto_mito 3  (predict for XP_003563039.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003563039.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100827351
bdi-r.1
for
100831928
tae-r.2
for
123087779
tae-r.2
for
123102512
tae-r.2
for
123110650
hvu-r.1
for
123394916
osa-u.5
for
4334688
zma-u.5
for
100191832
sbi-r.1
for
8063749
ath-u.5
for
AT5G22100
gma-u.5
for
100797356
gma-u.5
for
100778883
sly-u.5
for
101247688
bra-r.6
for
103843917
bra-r.6
for
103833060
vvi-u.5
for
100247518
ppo-u.5
for
7491124
ppo-u.5
for
7475138
mtr-u.5
for
25502079
ghi-r.1
for
107889221
ghi-r.1
for
107899878
bna-r.1
for
106449690
bna-r.1
for
106365737
bna-r.1
for
111206781
sot-r.1
for
102589355
cit-r.1
for
102631349
nta-r.1
for
107816483
nta-r.1
for
107807500
cre-r.1
for
CHLRE_09g400367v5


Ortholog ID: 6658
Species bdi bdi tae tae tae hvu osa zma sbi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100827351 LOC100831928 LOC123102512 LOC123110665 LOC123117608 LOC123394916 LOC4334688 LOC100191832 LOC8063749 AT5G22100 LOC100797356 LOC100778883 LOC101247688 LOC103843917 LOC103833060 LOC100247518 LOC7491124 LOC7475138 LOC25502079 LOC107889221 LOC107899878 LOC106449690 LOC106365737 LOC111206781 LOC102589355 LOC102631349 LOC107816483 LOC107807500 CHLRE_09g400367v5
Function* probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein RNA 3-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein RNA cyclase family protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein-like probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein probable RNA 3'-terminal phosphate cyclase-like protein putative RNA 3'-terminal phosphate cyclase-like protein putative RNA 3'-terminal phosphate cyclase-like protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03022 Basal transcription factors 2
hvu03420 Nucleotide excision repair 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03010 Ribosome 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
bna03040 Spliceosome 4
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100827351 100831928 123102512 123110665 123117608 123394916 4334688 100191832 8063749 832271 100797356 100778883 101247688 103843917 103833060 100247518 7491124 7475138 25502079 107889221 107899878 106449690 106365737 111206781 102589355 102631349 107816483 107807500 5723139
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