ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100828170	peptidyl-prolyl cis-trans isomerase CYP20-1
tae-r.2	542967	peptidyl-prolyl cis-trans isomerase CYP19-4
tae-r.2	123148543	peptidyl-prolyl cis-trans isomerase CYP19-4
tae-r.2	123156907	peptidyl-prolyl cis-trans isomerase CYP19-4
hvu-r.1	123407251	peptidyl-prolyl cis-trans isomerase CYP19-4-like
osa-u.5	4342022	peptidyl-prolyl cis-trans isomerase CYP20-1
osa-u.5	4342020	peptidyl-prolyl cis-trans isomerase CYP20-1
zma-u.5	107522027	Peptidyl-prolyl cis-trans isomerase CYP20-1
zma-u.5	109940172	peptidyl-prolyl cis-trans isomerase CYP20-1
zma-u.5	100283475	peptidyl-prolyl cis-trans isomerase CYP19-4
sbi-r.1	8064965	peptidyl-prolyl cis-trans isomerase CYP20-1
ath-u.5	CYP5	cyclophilin 5
ath-u.5	AT3G55920	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
ath-u.5	ROC7	rotamase CYP 7
gma-u.5	CYP34	peptidyl-prolyl cis-trans isomerase CYP34
gma-u.5	CYP24	peptidyl-prolyl cis-trans isomerase CYP24
sly-u.5	101253904	peptidyl-prolyl cis-trans isomerase B
sly-u.5	101255407	peptidyl-prolyl cis-trans isomerase CYP19-4
bra-r.6	103856667	peptidyl-prolyl cis-trans isomerase CYP20-1
bra-r.6	103841494	peptidyl-prolyl cis-trans isomerase CYP21-2
bra-r.6	103845303	peptidyl-prolyl cis-trans isomerase CYP20-1
vvi-u.5	100241683	peptidyl-prolyl cis-trans isomerase CYP20-1
vvi-u.5	100251977	peptidyl-prolyl cis-trans isomerase CYP20-1
ppo-u.5	7474436	peptidyl-prolyl cis-trans isomerase CYP19-4
ppo-u.5	7468558	peptidyl-prolyl cis-trans isomerase CYP20-1
ppo-u.5	7478530	peptidyl-prolyl cis-trans isomerase CYP20-1
mtr-u.5	25490877	peptidyl-prolyl cis-trans isomerase CYP20-1
ghi-r.1	121222639	peptidyl-prolyl cis-trans isomerase CYP19-4
ghi-r.1	107931852	peptidyl-prolyl cis-trans isomerase CYP19-4
ghi-r.1	107891621	peptidyl-prolyl cis-trans isomerase CYP19-4
bna-r.1	125590302	peptidyl-prolyl cis-trans isomerase CYP20-1
bna-r.1	125579203	peptidyl-prolyl cis-trans isomerase CYP20-1
bna-r.1	106440575	peptidyl-prolyl cis-trans isomerase CYP20-1
sot-r.1	102602764	peptidyl-prolyl cis-trans isomerase CYP19-4-like
sot-r.1	102589666	peptidyl-prolyl cis-trans isomerase CYP19-4
cit-r.1	102630374	peptidyl-prolyl cis-trans isomerase CYP19-4-like
cit-r.1	102622712	peptidyl-prolyl cis-trans isomerase CYP20-1
nta-r.1	107824613	peptidyl-prolyl cis-trans isomerase CYP20-1-like
nta-r.1	107767094	peptidyl-prolyl cis-trans isomerase CYP20-1
nta-r.1	107775419	peptidyl-prolyl cis-trans isomerase CYP19-4
cre-r.1	CHLRE_06g284900v5	uncharacterized protein

Top 50 coexpressed genes to 100828170 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100828170 (bdi-r.1 coexpression data)

CoexMap"100828170"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0000413 [list] [network] protein peptidyl-prolyl isomerization	(37 genes)	IEA
GO:0006457 [list] [network] protein folding	(168 genes)	IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(5231 genes)

IEA

GO MF

GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity

(60 genes)

IEA

Protein

XP_010227456.1 [sequence] [blastp]
XP_024312606.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 5, chlo 1, vacu 1, cyto 1, E.R. 1, golg 1, cyto_E.R. 1	(predict for XP_010227456.1)
mito 5, chlo 1, vacu 1, cyto 1, E.R. 1, golg 1, cyto_E.R. 1	(predict for XP_024312606.1)

Subcellular
localization
TargetP

mito 9	(predict for XP_010227456.1)
mito 9	(predict for XP_024312606.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100828170	tae-r.2 for 542967	tae-r.2 for 123148543	tae-r.2 for 123156907	hvu-r.1 for 123407251	osa-u.5 for 4342022	osa-u.5 for 4342020	zma-u.5 for 107522027	zma-u.5 for 109940172	zma-u.5 for 100283475	sbi-r.1 for 8064965	ath-u.5 for CYP5	ath-u.5 for AT3G55920	ath-u.5 for ROC7	gma-u.5 for CYP34	gma-u.5 for CYP24	sly-u.5 for 101253904	sly-u.5 for 101255407	bra-r.6 for 103856667	bra-r.6 for 103841494	bra-r.6 for 103845303	vvi-u.5 for 100241683	vvi-u.5 for 100251977	ppo-u.5 for 7474436	ppo-u.5 for 7468558	ppo-u.5 for 7478530	mtr-u.5 for 25490877	ghi-r.1 for 121222639	ghi-r.1 for 107931852	ghi-r.1 for 107891621	bna-r.1 for 125590302	bna-r.1 for 125579203	bna-r.1 for 106440575	sot-r.1 for 102602764	sot-r.1 for 102589666	cit-r.1 for 102630374	cit-r.1 for 102622712	nta-r.1 for 107824613	nta-r.1 for 107767094	nta-r.1 for 107775419	cre-r.1 for CHLRE_06g284900v5

Ortholog

Ortholog ID: 3203

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

CYP5

ROC7

CYP34

CYP24

Function^*

peptidyl-prolyl cis-trans isomerase CYP20-1

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP19-4-like

peptidyl-prolyl cis-trans isomerase CYP20-1

Peptidyl-prolyl cis-trans isomerase CYP20-1

peptidyl-prolyl cis-trans isomerase CYP20-1

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP20-1

cyclophilin 5

Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

rotamase CYP 7

peptidyl-prolyl cis-trans isomerase CYP34

peptidyl-prolyl cis-trans isomerase CYP24

peptidyl-prolyl cis-trans isomerase B

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP20-1

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP20-1

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP20-1

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP20-1

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP19-4-like

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP19-4-like

peptidyl-prolyl cis-trans isomerase CYP20-1

peptidyl-prolyl cis-trans isomerase CYP19-4

peptidyl-prolyl cis-trans isomerase CYP20-1-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae00510	N-Glycan biosynthesis	3
tae00513	Various types of N-glycan biosynthesis	3
tae00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3
tae00510	N-Glycan biosynthesis	2
tae00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	11
osa00510	N-Glycan biosynthesis	7
osa00513	Various types of N-glycan biosynthesis	7
osa03060	Protein export	2
osa04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00040	Pentose and glucuronate interconversions	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	10
zma03060	Protein export	3
zma04145	Phagosome	3
zma00510	N-Glycan biosynthesis	3
zma00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03060	Protein export	2
ath00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	11
ath04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma04141	Protein processing in endoplasmic reticulum	2
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	8
gma04145	Phagosome	3
gma04148	Efferocytosis	2
gma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	8
sly03060	Protein export	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	8
bra04145	Phagosome	6
bra03060	Protein export	4
bra04148	Efferocytosis	4
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2
bra00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra04145	Phagosome	2
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2
vvi03040	Spliceosome	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	6
vvi04145	Phagosome	3
vvi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	11
ppo04145	Phagosome	4
ppo00510	N-Glycan biosynthesis	2
ppo03060	Protein export	2
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	8
mtr04145	Phagosome	4
mtr03060	Protein export	3
mtr00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	11
ghi04145	Phagosome	5
ghi04148	Efferocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	11
ghi04145	Phagosome	5
ghi04148	Efferocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	2
bna00541	Biosynthesis of various nucleotide sugars	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	2
bna00920	Sulfur metabolism	2
bna04122	Sulfur relay system	2
bna04075	Plant hormone signal transduction	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	2
bna00920	Sulfur metabolism	2
bna04122	Sulfur relay system	2
bna04075	Plant hormone signal transduction	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	11
sot04145	Phagosome	3
sot00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit03010	Ribosome	3
cit03083	Polycomb repressive complex	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	6

Expression

Expression pattern

Entrez Gene ID^*

100828170

542967

123148543

123156907

123407251

4342022

4342020

107522027

109940172

100283475

8064965

817546

824758

835985

100792140

100305485

101253904

101255407

103856667

103845303

103867999

100241683

100251977

7474436

7468558

7478530

25490877

107931852

107891621

107889059

125590302

106434116

106377253

102602764

102589666

102630374

102622712

107767094

107787561

107804715

5720988

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	3	1	2	3	1	3	2	2	3	2	3	1	3	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100828170 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100828170 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**