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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100828233   protein SHOOT GRAVITROPISM 6 
 tae-r.2   123088140   protein SHOOT GRAVITROPISM 6 
 tae-r.2   123093498   protein SHOOT GRAVITROPISM 6 
 tae-r.2   123098775   protein SHOOT GRAVITROPISM 6 
 hvu-r.1   123449701   protein SHOOT GRAVITROPISM 6 
 osa-u.5   4331613   protein SHOOT GRAVITROPISM 6 
 zma-u.5   103644425   protein SHOOT GRAVITROPISM 6 
 sbi-r.1   8080557   protein SHOOT GRAVITROPISM 6 
 ath-u.5   AT2G36810   ARM repeat superfamily protein 
 gma-u.5   100800961   protein SHOOT GRAVITROPISM 6 
 sly-u.5   101255025   protein SHOOT GRAVITROPISM 6 
 bra-r.6   103865559   protein SHOOT GRAVITROPISM 6 
 vvi-u.5   100243631   protein SHOOT GRAVITROPISM 6 
 ppo-u.5   18100118   protein SHOOT GRAVITROPISM 6 
 mtr-u.5   11435263   protein SHOOT GRAVITROPISM 6 
 ghi-r.1   107908740   protein SHOOT GRAVITROPISM 6 
 ghi-r.1   107898798   protein SHOOT GRAVITROPISM 6 
 ghi-r.1   107888275   protein SHOOT GRAVITROPISM 6 
 bna-r.1   106394079   protein SHOOT GRAVITROPISM 6 
 bna-r.1   125594172   protein SHOOT GRAVITROPISM 6-like 
 sot-r.1   102585399   protein SHOOT GRAVITROPISM 6 
 cit-r.1   102625352   protein SHOOT GRAVITROPISM 6 
 nta-r.1   107824625   protein SHOOT GRAVITROPISM 6 
 nta-r.1   107768284   protein SHOOT GRAVITROPISM 6-like 

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Top 50 coexpressed genes to 100828233 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100828233 (bdi-r.1 coexpression data)

CoexMap"100828233"


bdiLOC100828233 | Entrez gene ID : 100828233      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 1 1 1 1 1 1 3 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
Protein XP_014752704.1 [sequence] [blastp]
XP_014752705.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  chlo 2,  cyto_plas 2,  cyto 1,  extr 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_014752704.1)
plas 3,  chlo 2,  cyto_plas 2,  cyto 1,  extr 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_014752705.1)
Subcellular
localization
TargetP
scret 5,  chlo 5  (predict for XP_014752704.1)
scret 5,  chlo 5  (predict for XP_014752705.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100828233
tae-r.2
for
123088140
tae-r.2
for
123093498
tae-r.2
for
123098775
hvu-r.1
for
123449701
osa-u.5
for
4331613
zma-u.5
for
103644425
sbi-r.1
for
8080557
ath-u.5
for
AT2G36810
gma-u.5
for
100800961
sly-u.5
for
101255025
bra-r.6
for
103865559
vvi-u.5
for
100243631
ppo-u.5
for
18100118
mtr-u.5
for
11435263
ghi-r.1
for
107908740
ghi-r.1
for
107898798
ghi-r.1
for
107888275
bna-r.1
for
106394079
bna-r.1
for
125594172
sot-r.1
for
102585399
cit-r.1
for
102625352
nta-r.1
for
107824625
nta-r.1
for
107768284


Ortholog ID: 10025
Species bdi tae tae tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta
Symbol LOC100828233 LOC123088140 LOC123093498 LOC123098775 LOC123449701 LOC4331613 LOC103644425 LOC8080557 AT2G36810 LOC100800961 LOC101255025 LOC103865559 LOC100243631 LOC18100118 LOC11435263 LOC107908740 LOC107898798 LOC107888275 LOC106394079 LOC125594172 LOC102585399 LOC102625352 LOC107824625 LOC107768284
Function* protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 ARM repeat superfamily protein protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6-like protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6 protein SHOOT GRAVITROPISM 6-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00020 Citrate cycle (TCA cycle) 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly00562 Inositol phosphate metabolism 2
sly04070 Phosphatidylinositol signaling system 2
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04136 Autophagy - other 2
ppo04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100828233 123088140 123093498 123098775 123449701 4331613 103644425 8080557 818253 100800961 101255025 103865559 100243631 18100118 11435263 107908740 107898798 107888275 106394079 125594172 102585399 102625352 107824625 107768284
The preparation time of this page was 2.5 [sec].