ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100828615	probable RNA methyltransferase At5g51130
tae-r.2	123157062	probable RNA methyltransferase At5g51130
tae-r.2	123152201	probable RNA methyltransferase At5g51130
tae-r.2	123152188	probable RNA methyltransferase At5g51130
hvu-r.1	123408741	probable RNA methyltransferase At5g51130
hvu-r.1	123408742	probable RNA methyltransferase At5g51130
osa-u.5	4346188	probable RNA methyltransferase At5g51130
zma-u.5	103652738	probable RNA methyltransferase At5g51130
zma-u.5	103654422	probable RNA methyltransferase At5g51130
sbi-r.1	8055278	probable RNA methyltransferase At5g51130
sbi-r.1	8060569	probable RNA methyltransferase At5g51130
ath-u.5	AT5G51130	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
gma-u.5	100500304	S-adenosylmethionine-dependent methyltransferases superfamily protein
sly-u.5	101255199	probable RNA methyltransferase At5g51130
bra-r.6	103857196	probable RNA methyltransferase At5g51130
vvi-u.5	100261137	probable RNA methyltransferase At5g51130
ppo-u.5	7488930	probable RNA methyltransferase At5g51130
mtr-u.5	11412377	probable RNA methyltransferase At5g51130
ghi-r.1	107933007	probable RNA methyltransferase At5g51130
ghi-r.1	107930782	probable RNA methyltransferase At5g51130
bna-r.1	125585438	probable RNA methyltransferase At5g51130
bna-r.1	106406882	probable RNA methyltransferase At5g51130
bna-r.1	106387920	probable RNA methyltransferase At5g51130
sot-r.1	102582951	probable RNA methyltransferase At5g51130
cit-r.1	102607054	probable RNA methyltransferase At5g51130
nta-r.1	107763349	putative RNA methyltransferase At5g51130
nta-r.1	107797299	putative RNA methyltransferase At5g51130
nta-r.1	107809636	putative RNA methyltransferase At5g51130
cre-r.1	CHLRE_15g636450v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0040031 [list] [network] snRNA modification

(5 genes)

IEA

GO CC

GO MF

GO:0017069 [list] [network] snRNA binding	(16 genes)	IEA
GO:0008171 [list] [network] O-methyltransferase activity	(40 genes)	IEA
GO:0008173 [list] [network] RNA methyltransferase activity	(50 genes)	IEA

Protein

XP_003574857.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, cysk 2, plas 1, golg 1, golg_plas 1

(predict for XP_003574857.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003574857.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100828615	tae-r.2 for 123157062	tae-r.2 for 123152201	tae-r.2 for 123152188	hvu-r.1 for 123408741	hvu-r.1 for 123408742	osa-u.5 for 4346188	zma-u.5 for 103652738	zma-u.5 for 103654422	sbi-r.1 for 8055278	sbi-r.1 for 8060569	ath-u.5 for AT5G51130	gma-u.5 for 100500304	sly-u.5 for 101255199	bra-r.6 for 103857196	vvi-u.5 for 100261137	ppo-u.5 for 7488930	mtr-u.5 for 11412377	ghi-r.1 for 107933007	ghi-r.1 for 107930782	bna-r.1 for 125585438	bna-r.1 for 106406882	bna-r.1 for 106387920	sot-r.1 for 102582951	cit-r.1 for 102607054	nta-r.1 for 107763349	nta-r.1 for 107797299	nta-r.1 for 107809636	cre-r.1 for CHLRE_15g636450v5

Ortholog

Ortholog ID: 6372

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

probable RNA methyltransferase At5g51130

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

S-adenosylmethionine-dependent methyltransferases superfamily protein

probable RNA methyltransferase At5g51130

putative RNA methyltransferase At5g51130

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00230	Purine metabolism	2
bdi01232	Nucleotide metabolism	2
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	2
tae00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu03420	Nucleotide excision repair	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	4
hvu03008	Ribosome biogenesis in eukaryotes	3
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00330	Arginine and proline metabolism	2
zma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3
sbi03440	Homologous recombination	2
sbi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00220	Arginine biosynthesis	2
nta01210	2-Oxocarboxylic acid metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00220	Arginine biosynthesis	2
nta01210	2-Oxocarboxylic acid metabolism	2
nta01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

100828615

123157062

123152201

123152188

123408741

123408742

4346188

103652738

103654422

8055278

8060569

835187

100500304

101255199

103857196

100261137

7488930

11412377

107933007

107930782

125585438

106387920

102582951

102607054

107763349

107797299

107809636

5726183

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100828615 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100828615 (bdi-r.1 coexpression data)


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	3	2	1	2	2	1	1	1	1	1	1	1	2	3	1	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100828615 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100828615 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**