ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100829276	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
bdi-r.1	100821860	glycine-rich protein 5
tae-r.2	123062918	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
tae-r.2	123071786	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
tae-r.2	123080112	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
hvu-r.1	123445103	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like
hvu-r.1	123447838	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
osa-u.5	4324890	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
osa-u.5	4350175	uncharacterized LOC4350175
zma-u.5	100278545	uncharacterized LOC100278545
sbi-r.1	8057153	glycine-rich cell wall structural protein
sbi-r.1	8058465	glycine-rich cell wall structural protein 1
sbi-r.1	8063153	alanine and glycine-rich protein
ath-u.5	AT4G10330	glycine-rich protein
gma-u.5	100807124	keratin, type II cuticular Hb4
gma-u.5	100804802	ATP-dependent RNA helicase glh-2
sly-u.5	101258716	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
bra-r.6	103853561	keratin-associated protein 6-2
vvi-u.5	100251600	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
ppo-u.5	112325218	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic
mtr-u.5	25496570	glycine-rich cell wall structural protein 1
ghi-r.1	107909124	uncharacterized LOC107909124
ghi-r.1	107928253	uncharacterized LOC107928253
bna-r.1	106440451	keratin-associated protein 6-2
bna-r.1	106423487	keratin-associated protein 6-2
sot-r.1	102594019	glycine-rich cell wall structural protein 1
cit-r.1	102608911	uncharacterized LOC102608911
nta-r.1	107779538	uncharacterized LOC107779538
nta-r.1	107821170	uncharacterized LOC107821170

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003564799.1 [sequence] [blastp]
XP_024315156.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, extr 2, cyto_mito 2, mito_plas 2	(predict for XP_003564799.1)
mito 4, extr 2, cyto_mito 2, mito_plas 2	(predict for XP_024315156.1)

Subcellular
localization
TargetP

mito 9	(predict for XP_003564799.1)
mito 9	(predict for XP_024315156.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100829276	bdi-r.1 for 100821860	tae-r.2 for 123062918	tae-r.2 for 123071786	tae-r.2 for 123080112	hvu-r.1 for 123445103	hvu-r.1 for 123447838	osa-u.5 for 4324890	osa-u.5 for 4350175	zma-u.5 for 100278545	sbi-r.1 for 8057153	sbi-r.1 for 8058465	sbi-r.1 for 8063153	ath-u.5 for AT4G10330	gma-u.5 for 100807124	gma-u.5 for 100804802	sly-u.5 for 101258716	bra-r.6 for 103853561	vvi-u.5 for 100251600	ppo-u.5 for 112325218	mtr-u.5 for 25496570	ghi-r.1 for 107909124	ghi-r.1 for 107928253	bna-r.1 for 106440451	bna-r.1 for 106423487	sot-r.1 for 102594019	cit-r.1 for 102608911	nta-r.1 for 107779538	nta-r.1 for 107821170

Ortholog

Ortholog ID: 6921

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic

glycine-rich protein 5

protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic

protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like

protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic

uncharacterized LOC4350175

uncharacterized LOC100278545

glycine-rich cell wall structural protein

glycine-rich cell wall structural protein 1

alanine and glycine-rich protein

glycine-rich protein

keratin, type II cuticular Hb4

ATP-dependent RNA helicase glh-2

protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic

keratin-associated protein 6-2

protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic

glycine-rich cell wall structural protein 1

uncharacterized LOC107909124

uncharacterized LOC107928253

keratin-associated protein 6-2

glycine-rich cell wall structural protein 1

uncharacterized LOC102608911

uncharacterized LOC107779538

uncharacterized LOC107821170

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2
bdi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00510	N-Glycan biosynthesis	3
ath00513	Various types of N-glycan biosynthesis	3
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma03050	Proteasome	2
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	6
sly00710	Carbon fixation by Calvin cycle	4
sly00260	Glycine, serine and threonine metabolism	3
sly00630	Glyoxylate and dicarboxylate metabolism	3
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	4
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	3
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	5
ghi03015	mRNA surveillance pathway	2
ghi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	5
ghi03015	mRNA surveillance pathway	2
ghi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	8

Expression

Expression pattern

Entrez Gene ID^*

100829276

100821860

123062918

123071786

123091227

123445103

123447838

4324890

4350175

100278545

8057153

8058465

8063153

826625

100807124

100804802

101258716

103853561

100251600

112325218

25496570

107909124

107928253

106440451

106423487

102594019

102608911

107779538

107821170

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100829276 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100829276 (bdi-r.1 coexpression data)


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	2	1	3	1	2	1	1	1	1	1	2	2	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100829276 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100829276 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**