ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100830170	probable methyltransferase PMT13
tae-r.2	123054140	probable pectin methyltransferase QUA3
tae-r.2	123190033	probable pectin methyltransferase QUA3
tae-r.2	123046273	probable pectin methyltransferase QUA3
hvu-r.1	123427472	probable pectin methyltransferase QUA3
osa-u.5	4336707	probable pectin methyltransferase QUA3
zma-u.5	103646060	probable methyltransferase PMT13
sbi-r.1	8060404	probable methyltransferase PMT13
ath-u.5	QUA3	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
gma-u.5	100782539	probable pectin methyltransferase QUA3
gma-u.5	100778824	probable pectin methyltransferase QUA3
gma-u.5	100812418	probable pectin methyltransferase QUA3
sly-u.5	101258783	probable pectin methyltransferase QUA3
bra-r.6	103836898	probable methyltransferase PMT13
bra-r.6	103858854	probable methyltransferase PMT13
vvi-u.5	100255820	probable pectin methyltransferase QUA3
ppo-u.5	7464892	probable pectin methyltransferase QUA3
mtr-u.5	25502320	probable pectin methyltransferase QUA3
mtr-u.5	11426702	probable pectin methyltransferase QUA3
ghi-r.1	107900260	probable pectin methyltransferase QUA3
ghi-r.1	107957263	probable pectin methyltransferase QUA3
ghi-r.1	107930505	probable pectin methyltransferase QUA3
bna-r.1	106365534	probable pectin methyltransferase QUA3
bna-r.1	106438606	probable pectin methyltransferase QUA3
bna-r.1	106365538	probable pectin methyltransferase QUA3
sot-r.1	102588181	probable methyltransferase PMT13
cit-r.1	127901248	probable pectin methyltransferase QUA3
cit-r.1	102627323	probable pectin methyltransferase QUA3
nta-r.1	107788240	putative pectin methyltransferase QUA3
nta-r.1	107774177	putative pectin methyltransferase QUA3

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005802 [list] [network] trans-Golgi network	(94 genes)	IEA
GO:0005768 [list] [network] endosome	(159 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4615 genes)	IEA

GO MF

GO:0008168 [list] [network] methyltransferase activity

(253 genes)

IEA

Protein

XP_003580350.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, E.R. 1

(predict for XP_003580350.1)

Subcellular
localization
TargetP

mito 7, other 7

(predict for XP_003580350.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100830170	tae-r.2 for 123054140	tae-r.2 for 123190033	tae-r.2 for 123046273	hvu-r.1 for 123427472	osa-u.5 for 4336707	zma-u.5 for 103646060	sbi-r.1 for 8060404	ath-u.5 for QUA3	gma-u.5 for 100782539	gma-u.5 for 100778824	gma-u.5 for 100812418	sly-u.5 for 101258783	bra-r.6 for 103836898	bra-r.6 for 103858854	vvi-u.5 for 100255820	ppo-u.5 for 7464892	mtr-u.5 for 25502320	mtr-u.5 for 11426702	ghi-r.1 for 107900260	ghi-r.1 for 107957263	ghi-r.1 for 107930505	bna-r.1 for 106365534	bna-r.1 for 106438606	bna-r.1 for 106365538	sot-r.1 for 102588181	cit-r.1 for 127901248	cit-r.1 for 102627323	nta-r.1 for 107788240	nta-r.1 for 107774177

Ortholog

Ortholog ID: 6308

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

QUA3

Function^*

probable methyltransferase PMT13

probable pectin methyltransferase QUA3

probable methyltransferase PMT13

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

probable pectin methyltransferase QUA3

probable methyltransferase PMT13

probable pectin methyltransferase QUA3

probable methyltransferase PMT13

probable pectin methyltransferase QUA3

putative pectin methyltransferase QUA3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	5
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae03013	Nucleocytoplasmic transport	3
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00670	One carbon pool by folate	5
gma01240	Biosynthesis of cofactors	4
gma00270	Cysteine and methionine metabolism	4
gma01230	Biosynthesis of amino acids	4
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	3
gma00620	Pyruvate metabolism	3
gma01200	Carbon metabolism	3
gma01240	Biosynthesis of cofactors	3
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	7
bra04517	IgSF CAM signaling	7
bra04814	Motor proteins	7
bra00520	Amino sugar and nucleotide sugar metabolism	3
bra01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	3
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

100830170

123054140

123190033

123046273

123427472

4336707

103646060

8060404

828020

100778824

100812418

100788069

101258783

103836898

103858854

100255820

7464892

25502320

11426702

107957263

107922256

107911954

106365534

106438606

106365538

102588181

127901248

102627323

107788240

107774177

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100830170 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100830170 (bdi-r.1 coexpression data)


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	1	3	1	1	1	1	1	3	1	2	1	1	2	3	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100830170 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100830170 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**