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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100831526   U3 small nucleolar RNA-associated protein 25 
 tae-r.2   123123676   U3 small nucleolar RNA-associated protein 25 
 tae-r.2   123087747   U3 small nucleolar RNA-associated protein 25 
 tae-r.2   123114190   U3 small nucleolar RNA-associated protein 25 
 hvu-r.1   123394955   U3 small nucleolar RNA-associated protein 25 
 osa-u.5   4338320   protein NUCLEOLAR FACTOR 1 
 zma-u.5   103640742   U3 small nucleolar RNA-associated protein 25 
 sbi-r.1   8074871   U3 small nucleolar RNA-associated protein 25 
 ath-u.5   NOF1   U3 small nucleolar RNA-associated protein 
 gma-u.5   100810500   U3 small nucleolar RNA-associated protein 25 
 gma-u.5   100779633   U3 small nucleolar RNA-associated protein 25 
 sly-u.5   101246643   protein NUCLEOLAR FACTOR 1 
 bra-r.6   103835946   U3 small nucleolar RNA-associated protein 25 
 vvi-u.5   100254023   protein NUCLEOLAR FACTOR 1 
 ppo-u.5   18111188   protein NUCLEOLAR FACTOR 1 
 mtr-u.5   25502655   U3 small nucleolar RNA-associated protein 25 
 mtr-u.5   11436387   U3 small nucleolar RNA-associated protein 25 
 mtr-u.5   11444888   U3 small nucleolar RNA-associated protein 25 
 ghi-r.1   107907358   digestive organ expansion factor homolog 
 ghi-r.1   107907503   digestive organ expansion factor homolog 
 bna-r.1   106358581   U3 small nucleolar RNA-associated protein 25 
 bna-r.1   106391535   U3 small nucleolar RNA-associated protein 25-like 
 sot-r.1   102593618   U3 small nucleolar RNA-associated protein 25 
 cit-r.1   102618633   protein NUCLEOLAR FACTOR 1 
 nta-r.1   107821000   protein NUCLEOLAR FACTOR 1 
 nta-r.1   107815595   protein NUCLEOLAR FACTOR 1 
 cre-r.1   CHLRE_04g218300v5   uncharacterized protein 

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Top 50 coexpressed genes to 100831526 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100831526 (bdi-r.1 coexpression data)

CoexMap"100831526"


bdiLOC100831526 | Entrez gene ID : 100831526    
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 3 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (37 genes)  IEA  
GO CC
GO:0032040 [list] [network] small-subunit processome  (42 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (178 genes)  IEA  
GO MF
GO:0034511 [list] [network] U3 snoRNA binding  (4 genes)  IEA  
GO:0019843 [list] [network] rRNA binding  (68 genes)  IEA  
Protein XP_024314423.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  mito 1  (predict for XP_024314423.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_024314423.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100831526
tae-r.2
for
123123676
tae-r.2
for
123087747
tae-r.2
for
123114190
hvu-r.1
for
123394955
osa-u.5
for
4338320
zma-u.5
for
103640742
sbi-r.1
for
8074871
ath-u.5
for
NOF1
gma-u.5
for
100810500
gma-u.5
for
100779633
sly-u.5
for
101246643
bra-r.6
for
103835946
vvi-u.5
for
100254023
ppo-u.5
for
18111188
mtr-u.5
for
25502655
mtr-u.5
for
11436387
mtr-u.5
for
11444888
ghi-r.1
for
107907358
ghi-r.1
for
107907503
bna-r.1
for
106358581
bna-r.1
for
106391535
sot-r.1
for
102593618
cit-r.1
for
102618633
nta-r.1
for
107821000
nta-r.1
for
107815595
cre-r.1
for
CHLRE_04g218300v5


Ortholog ID: 8700
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr mtr mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100831526 LOC123123676 LOC123087747 LOC123114190 LOC123394955 LOC4338320 LOC103640742 LOC8074871 NOF1 LOC100810500 LOC100779633 LOC101246643 LOC103835946 LOC100254023 LOC18111188 LOC11436387 LOC11444888 LOC25494395 LOC107907358 LOC107907503 LOC106358581 LOC106391535 LOC102593618 LOC102618633 LOC107821000 LOC107815595 CHLRE_04g218300v5
Function* U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 protein NUCLEOLAR FACTOR 1 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 protein NUCLEOLAR FACTOR 1 U3 small nucleolar RNA-associated protein 25 protein NUCLEOLAR FACTOR 1 protein NUCLEOLAR FACTOR 1 U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25 uncharacterized LOC25494395 digestive organ expansion factor homolog digestive organ expansion factor homolog U3 small nucleolar RNA-associated protein 25 U3 small nucleolar RNA-associated protein 25-like U3 small nucleolar RNA-associated protein 25 protein NUCLEOLAR FACTOR 1 protein NUCLEOLAR FACTOR 1 protein NUCLEOLAR FACTOR 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03013 Nucleocytoplasmic transport 4
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr03022 Basal transcription factors 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100831526 123123676 123087747 123114190 123394955 4338320 103640742 8074871 838345 100810500 100779633 101246643 103835946 100254023 18111188 11436387 11444888 25494395 107907358 107907503 106358581 106391535 102593618 102618633 107821000 107815595 5717837
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