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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100832508   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 bdi-r.1   100822586   probable cellulose synthase A catalytic subunit 2 [UDP-forming] 
 bdi-r.1   100830844   cellulose synthase A catalytic subunit 7 [UDP-forming] 
 bdi-r.1   100821105   probable cellulose synthase A catalytic subunit 1 [UDP-forming] 
 tae-r.2   123062060   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 tae-r.2   123070786   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 tae-r.2   123051534   probable cellulose synthase A catalytic subunit 8 [UDP-forming] 
 hvu-r.1   123398002   cellulose synthase A catalytic subunit 9 [UDP-forming] 
 hvu-r.1   123394950   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 hvu-r.1   123401282   probable cellulose synthase A catalytic subunit 1 [UDP-forming] 
 osa-u.5   4324625   cellulose synthase A catalytic subunit 4 [UDP-forming]-like 
 osa-u.5   4334515   probable cellulose synthase A catalytic subunit 2 [UDP-forming] 
 osa-u.5   4334710   probable cellulose synthase A catalytic subunit 5 [UDP-forming] 
 zma-u.5   100280232   Cellulose synthase A catalytic subunit 5 [UDP-forming] 
 zma-u.5   542685   cellulose synthase10 
 zma-u.5   541802   cellulose synthase-1 
 sbi-r.1   8060268   cellulose synthase A catalytic subunit 9 [UDP-forming] 
 sbi-r.1   110432834   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 sbi-r.1   8054430   probable cellulose synthase A catalytic subunit 6 [UDP-forming] 
 ath-u.5   CESA6   cellulose synthase 6 
 ath-u.5   CESA9   cellulose synthase A9 
 ath-u.5   CESA10   cellulose synthase A catalytic subunit 3 UDP-forming-like protein 
 gma-u.5   100789617   cellulose synthase A catalytic subunit 8 [UDP-forming] 
 gma-u.5   100819146   cellulose synthase A catalytic subunit 6 [UDP-forming] 
 sly-u.5   101261539   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 sly-u.5   101246863   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 sly-u.5   101248382   cellulose synthase A catalytic subunit 2 [UDP-forming] 
 bra-r.6   103873901   cellulose synthase A catalytic subunit 6 [UDP-forming] 
 bra-r.6   103862122   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 vvi-u.5   100264552   probable cellulose synthase A catalytic subunit 9 [UDP-forming]-like 
 vvi-u.5   100264115   probable cellulose synthase A catalytic subunit 5 [UDP-forming] 
 vvi-u.5   100241197   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 ppo-u.5   18098691   probable cellulose synthase A catalytic subunit 3 [UDP-forming] 
 ppo-u.5   7459022   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 ppo-u.5   7459550   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 mtr-u.5   11440412   cellulose synthase A catalytic subunit 7 [UDP-forming] 
 mtr-u.5   25485999   cellulose synthase A catalytic subunit 8 [UDP-forming] 
 mtr-u.5   25484218   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 ghi-r.1   107911480   cellulose synthase A catalytic subunit 2 [UDP-forming] 
 ghi-r.1   107914099   cellulose synthase A catalytic subunit 5 [UDP-forming] 
 ghi-r.1   107915763   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 bna-r.1   106428042   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 bna-r.1   106382983   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 bna-r.1   106452631   cellulose synthase A catalytic subunit 3 [UDP-forming] 
 sot-r.1   102578178   cellulose synthase A catalytic subunit 7 [UDP-forming] 
 sot-r.1   102577812   cellulose synthase A catalytic subunit 2 [UDP-forming] 
 sot-r.1   102597254   cellulose synthase A catalytic subunit 4 [UDP-forming] 
 cit-r.1   102629226   cellulose synthase A catalytic subunit 8 [UDP-forming] 
 nta-r.1   107805577   cellulose synthase A catalytic subunit 2 [UDP-forming] 
 nta-r.1   107795298   cellulose synthase A catalytic subunit 1 [UDP-forming] 
 nta-r.1   107790031   cellulose synthase A catalytic subunit 1 [UDP-forming] 

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Top 50 coexpressed genes to 100832508 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100832508 (bdi-r.1 coexpression data)

CoexMap"100832508"


bdiLOC100832508 | Entrez gene ID : 100832508      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 3 3 3 3 3 2 3 2 3 3 3 3 3 3 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009833 [list] [network] plant-type primary cell wall biogenesis  (26 genes)  IEA  
GO:0030244 [list] [network] cellulose biosynthetic process  (35 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (94 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (914 genes)  IEA  
GO MF
GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity  (26 genes)  IEA  
Protein XP_010239070.1 [sequence] [blastp]
XP_014752441.1 [sequence] [blastp]
XP_024312709.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_010239070.1)
plas 8,  golg_plas 5,  golg 1  (predict for XP_014752441.1)
plas 8,  nucl 1  (predict for XP_024312709.1)
Subcellular
localization
TargetP
mito 7,  other 6  (predict for XP_010239070.1)
other 7  (predict for XP_014752441.1)
other 8  (predict for XP_024312709.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100832508
bdi-r.1
for
100822586
bdi-r.1
for
100830844
bdi-r.1
for
100821105
tae-r.2
for
123062060
tae-r.2
for
123070786
tae-r.2
for
123051534
hvu-r.1
for
123398002
hvu-r.1
for
123394950
hvu-r.1
for
123401282
osa-u.5
for
4324625
osa-u.5
for
4334515
osa-u.5
for
4334710
zma-u.5
for
100280232
zma-u.5
for
542685
zma-u.5
for
541802
sbi-r.1
for
8060268
sbi-r.1
for
110432834
sbi-r.1
for
8054430
ath-u.5
for
CESA6
ath-u.5
for
CESA9
ath-u.5
for
CESA10
gma-u.5
for
100789617
gma-u.5
for
100819146
sly-u.5
for
101261539
sly-u.5
for
101246863
sly-u.5
for
101248382
bra-r.6
for
103873901
bra-r.6
for
103862122
vvi-u.5
for
100264552
vvi-u.5
for
100264115
vvi-u.5
for
100241197
ppo-u.5
for
18098691
ppo-u.5
for
7459022
ppo-u.5
for
7459550
mtr-u.5
for
11440412
mtr-u.5
for
25485999
mtr-u.5
for
25484218
ghi-r.1
for
107911480
ghi-r.1
for
107914099
ghi-r.1
for
107915763
bna-r.1
for
106428042
bna-r.1
for
106382983
bna-r.1
for
106452631
sot-r.1
for
102578178
sot-r.1
for
102577812
sot-r.1
for
102597254
cit-r.1
for
102629226
nta-r.1
for
107805577
nta-r.1
for
107795298
nta-r.1
for
107790031


Ortholog ID: 120
Species bdi bdi bdi tae tae tae hvu hvu hvu osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta
Symbol LOC100822586 LOC100833611 LOC100843814 LOC123051534 LOC123079172 LOC123105553 LOC123398002 LOC123401282 LOC123426920 LOC4324625 LOC4343049 LOC4337958 LOC542489 LOC542514 LOC103647318 LOC8057104 LOC8080185 LOC8083471 CESA9 IRX3 CESA4 LOC100798759 LOC100793104 LOC100790276 LOC101246281 LOC101265982 LOC101263703 LOC103840033 LOC103855617 LOC103861013 LOC100242715 LOC100252166 LOC100256811 LOC18098691 LOC7470198 LOC7492474 LOC11440412 LOC11443809 LOC25499513 LOC107909647 LOC107953681 LOC107950592 LOC106411008 LOC106384921 LOC111203360 LOC102578178 LOC102597254 LOC102577470 LOC102629226 LOC102617105 LOC107771167 LOC107828491 LOC107817758
Function* probable cellulose synthase A catalytic subunit 2 [UDP-forming] probable cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 9 [UDP-forming] probable cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming] probable cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 9 [UDP-forming] probable cellulose synthase A catalytic subunit 1 [UDP-forming] probable cellulose synthase A catalytic subunit 1 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming]-like probable cellulose synthase A catalytic subunit 3 [UDP-forming] probable cellulose synthase A catalytic subunit 1 [UDP-forming] cellulose synthase 3 cellulose synthase catalytic subunit 12 probable cellulose synthase A catalytic subunit 6 [UDP-forming] probable cellulose synthase A catalytic subunit 2 [UDP-forming] probable cellulose synthase A catalytic subunit 5 [UDP-forming] cellulose synthase A catalytic subunit 5 [UDP-forming] cellulose synthase A9 Cellulose synthase family protein cellulose synthase A4 cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming] cellulose synthase A catalytic subunit 5 [UDP-forming] probable cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 8 [UDP-forming] probable cellulose synthase A catalytic subunit 5 [UDP-forming] probable cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] probable cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 7 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 8 [UDP-forming]-like cellulose synthase A catalytic subunit 7 [UDP-forming]-like cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming] cellulose synthase A catalytic subunit 5 [UDP-forming] cellulose synthase A catalytic subunit 1 [UDP-forming]-like cellulose synthase A catalytic subunit 7 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming] cellulose synthase A catalytic subunit 2 [UDP-forming] cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 3 [UDP-forming] cellulose synthase A catalytic subunit 8 [UDP-forming] cellulose synthase A catalytic subunit 4 [UDP-forming]-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 4
bdi00460 Cyanoamino acid metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04517 IgSF CAM signaling 3
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 2
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100822586 100833611 100843814 123051534 123079172 123105553 123398002 123401282 123426920 4324625 4343049 4337958 542489 542514 103647318 8057104 8080185 8083471 816713 831608 834426 100798759 100793104 100790276 101246281 101265982 101263703 103840033 103855617 103861013 100242715 100252166 100256811 18098691 7470198 7492474 11440412 11443809 25499513 107909647 107953681 107950592 106411008 106384921 111203360 102578178 102597254 102577470 102629226 102617105 107771167 107828491 107817758
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