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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100834038   FAD synthetase, chloroplastic 
 tae-r.2   123111818   FAD synthetase, chloroplastic 
 tae-r.2   123121374   FAD synthetase, chloroplastic 
 tae-r.2   123103602   FAD synthetase, chloroplastic 
 hvu-r.1   123397813   FAD synthetase, chloroplastic-like 
 osa-u.5   4334460   FAD synthetase, chloroplastic-like 
 zma-u.5   100284794   riboflavin kinase family protein 
 sbi-r.1   8061149   FAD synthetase, chloroplastic 
 ath-u.5   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-u.5   AT5G23330   Nucleotidylyl transferase superfamily protein 
 gma-u.5   100808911   FAD synthetase 1, chloroplastic 
 sly-u.5   101268091   nucleotidyl transferase superfamily protein 
 bra-r.6   103855777   FAD synthetase 2, chloroplastic 
 vvi-u.5   100254929   FAD synthetase 1, chloroplastic 
 ppo-u.5   7457162   FAD synthetase 2, chloroplastic 
 mtr-u.5   11425430   FAD synthetase 1, chloroplastic 
 ghi-r.1   107949010   FAD synthetase 2, chloroplastic 
 ghi-r.1   107898875   FAD synthetase 2, chloroplastic 
 bna-r.1   106384973   FAD synthetase 2, chloroplastic 
 bna-r.1   111210462   FAD synthetase 2, chloroplastic-like 
 sot-r.1   102585096   FAD synthetase 1, chloroplastic-like 
 cit-r.1   102621412   FAD synthetase 2, chloroplastic 
 nta-r.1   107777556   FAD synthetase 2, chloroplastic 
 nta-r.1   107762451   FAD synthetase 2, chloroplastic 
 cre-r.1   CHLRE_13g607600v5   uncharacterized protein 

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Top 50 coexpressed genes to 100834038 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834038 (bdi-r.1 coexpression data)

CoexMap"100834038"


bdiLOC100834038 | Entrez gene ID : 100834038      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 2 1 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00740 [list] [network] Riboflavin metabolism (21 genes)
bdi01240 [list] [network] Biosynthesis of cofactors (240 genes)
GO BP
GO:0006481 [list] [network] C-terminal protein methylation  (2 genes)  IEA  
GO:0009231 [list] [network] riboflavin biosynthetic process  (12 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (470 genes)  IEA  
GO MF
GO:0004671 [list] [network] protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity  (2 genes)  IEA  
GO:0003919 [list] [network] FMN adenylyltransferase activity  (3 genes)  IEA  
Protein XP_003557143.1 [sequence] [blastp]
XP_010228224.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_003557143.1)
chlo 9,  mito 1  (predict for XP_010228224.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003557143.1)
chlo 8,  mito 3  (predict for XP_010228224.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100834038
tae-r.2
for
123111818
tae-r.2
for
123121374
tae-r.2
for
123103602
hvu-r.1
for
123397813
osa-u.5
for
4334460
zma-u.5
for
100284794
sbi-r.1
for
8061149
ath-u.5
for
AT5G08340
ath-u.5
for
AT5G23330
gma-u.5
for
100808911
sly-u.5
for
101268091
bra-r.6
for
103855777
vvi-u.5
for
100254929
ppo-u.5
for
7457162
mtr-u.5
for
11425430
ghi-r.1
for
107949010
ghi-r.1
for
107898875
bna-r.1
for
106384973
bna-r.1
for
111210462
sot-r.1
for
102585096
cit-r.1
for
102621412
nta-r.1
for
107777556
nta-r.1
for
107762451
cre-r.1
for
CHLRE_13g607600v5


Ortholog ID: 9644
Species bdi tae tae tae hvu osa zma sbi ath ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100834038 LOC123111818 LOC123121374 LOC123103602 LOC123397813 LOC4334460 LOC100284794 LOC8061149 AT5G08340 AT5G23330 LOC100808911 LOC101268091 LOC103855777 LOC100254929 LOC7457162 LOC11425430 LOC107949010 LOC107898875 LOC106384973 LOC111210462 LOC102585096 LOC102621412 LOC107777556 LOC107762451 CHLRE_13g607600v5
Function* FAD synthetase, chloroplastic FAD synthetase, chloroplastic FAD synthetase, chloroplastic FAD synthetase, chloroplastic FAD synthetase, chloroplastic-like FAD synthetase, chloroplastic-like riboflavin kinase family protein FAD synthetase, chloroplastic Nucleotidylyl transferase superfamily protein Nucleotidylyl transferase superfamily protein FAD synthetase 1, chloroplastic nucleotidyl transferase superfamily protein FAD synthetase 2, chloroplastic FAD synthetase 1, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 1, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic-like FAD synthetase 1, chloroplastic-like FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00740 Riboflavin metabolism 2
sly01240 Biosynthesis of cofactors 2
sly04141 Protein processing in endoplasmic reticulum 2
sly00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00030 Pentose phosphate pathway 3
nta00230 Purine metabolism 3
nta01200 Carbon metabolism 3
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00030 Pentose phosphate pathway 3
nta00230 Purine metabolism 3
nta01200 Carbon metabolism 3
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00620 Pyruvate metabolism 3
cre01210 2-Oxocarboxylic acid metabolism 2
cre00061 Fatty acid biosynthesis 2
cre00640 Propanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100834038 123111818 123121374 123103602 123397813 4334460 100284794 8061149 830732 832397 100808911 101268091 103855777 100254929 7457162 11425430 107949010 107898875 106384973 111210462 102585096 102621412 107777556 107762451 5724704
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