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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1  100834403  protein CROWDED NUCLEI 4 
 tae-r.2  123079284  nuclear matrix constituent protein 1b 
 tae-r.2  123070898  nuclear matrix constituent protein 1b 
 tae-r.2  123062169  nuclear matrix constituent protein 1b 
 hvu-r.1  123444504  nuclear matrix constituent protein 1b-like 
 osa-u.5  4325497  protein CROWDED NUCLEI 4 
 zma-u.5  100216960  uncharacterized LOC100216960 
 sbi-r.1  110434066  protein CROWDED NUCLEI 4-like 
 gma-u.5  100804453  protein CROWDED NUCLEI 4 
 gma-u.5  100783880  protein CROWDED NUCLEI 4 
 sly-u.5  101246104  protein CROWDED NUCLEI 4 
 bra-r.6  103837593  protein CROWDED NUCLEI 4 
 vvi-u.5  100245758  protein CROWDED NUCLEI 4 
 ppo-u.5  7485207  protein CROWDED NUCLEI 4 
 mtr-u.5  25493541  protein CROWDED NUCLEI 4 
 ghi-r.1  107944662  uncharacterized LOC107944662 
 ghi-r.1  121220331  uncharacterized LOC121220331 
 ghi-r.1  107898996  protein CROWDED NUCLEI 4 
 bna-r.1  106348094  protein CROWDED NUCLEI 4 
 bna-r.1  106413271  protein CROWDED NUCLEI 4 
 bna-r.1  106445935  protein CROWDED NUCLEI 4 
 sot-r.1  102582491  protein CROWDED NUCLEI 4 
 cit-r.1  102613597  protein CROWDED NUCLEI 4 
 nta-r.1  107815585  uncharacterized LOC107815585 
 nta-r.1  107796185  uncharacterized LOC107796185 

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Top 50 coexpressed genes to 100834403 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834403 (bdi-r.1 coexpression data)

CoexMap"100834403"


bdiLOC100834403 | Entrez gene ID : 100834403
Species bdi tae hvu osa zma sbi gma sly bra vvi ppo mtr ghi bna sot cit nta ath cre
Paralog 1 3 1 1 1 1 2 1 1 1 1 1 3 3 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006997 [list] [network] nucleus organization  (14 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
Protein XP_010232388.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1  (predict for XP_010232388.1)
Subcellular
localization
TargetP
other 9  (predict for XP_010232388.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bdi-r.1
for
100834403


tae-r.2
for
123079284


tae-r.2
for
123070898


tae-r.2
for
123062169


hvu-r.1
for
123444504


osa-u.5
for
4325497


zma-u.5
for
100216960


sbi-r.1
for
110434066


gma-u.5
for
100804453


gma-u.5
for
100783880


sly-u.5
for
101246104


bra-r.6
for
103837593


vvi-u.5
for
100245758


ppo-u.5
for
7485207


mtr-u.5
for
25493541


ghi-r.1
for
107944662


ghi-r.1
for
121220331


ghi-r.1
for
107898996


bna-r.1
for
106348094


bna-r.1
for
106413271


bna-r.1
for
106445935


sot-r.1
for
102582491


cit-r.1
for
102613597


nta-r.1
for
107815585


nta-r.1
for
107796185



Ortholog ID: 7012
Species bdi tae tae tae hvu osa zma sbi gma gma sly bra vvi ppo mtr ghi ghi ghi bna bna bna sot cit nta nta
Symbol LOC100834403 LOC123079284 LOC123070898 LOC123062169 LOC123444504 LOC4325497 LOC100216960 LOC110434066 LOC100804453 LOC100783880 LOC101246104 LOC103837593 LOC100245758 LOC7485207 LOC25493541 LOC107898996 LOC107900166 LOC107935256 LOC106348094 LOC106413271 LOC106445935 LOC102582491 LOC102613597 LOC107815585 LOC107796185
Function* protein CROWDED NUCLEI 4 nuclear matrix constituent protein 1b nuclear matrix constituent protein 1b nuclear matrix constituent protein 1b nuclear matrix constituent protein 1b-like protein CROWDED NUCLEI 4 uncharacterized LOC100216960 protein CROWDED NUCLEI 4-like protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 uncharacterized LOC107900166 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 protein CROWDED NUCLEI 4 uncharacterized LOC107815585 uncharacterized LOC107796185
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
bra03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100834403 123079284 123070898 123062169 123444504 4325497 100216960 110434066 100804453 100783880 101246104 103837593 100245758 7485207 25493541 107898996 107900166 107935256 106348094 106413271 106445935 102582491 102613597 107815585 107796185
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