ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100834545	uncharacterized LOC100834545
bdi-r.1	100824972	uncharacterized LOC100824972
tae-r.2	123157389	uncharacterized LOC123157389
tae-r.2	123120704	uncharacterized LOC123120704
tae-r.2	123165245	uncharacterized LOC123165245
hvu-r.1	123443481	uncharacterized LOC123443481
hvu-r.1	123409091	uncharacterized LOC123409091
osa-u.5	4350916	uncharacterized LOC4350916
osa-u.5	4340472	uncharacterized LOC4340472
zma-u.5	100191550	uncharacterized LOC100191550
zma-u.5	103637883	uncharacterized LOC103637883
zma-u.5	100277688	uncharacterized LOC100277688
sbi-r.1	8070766	uncharacterized LOC8070766
sbi-r.1	8066734	uncharacterized LOC8066734
ath-u.5	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-u.5	AT5G44250	peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53)
gma-u.5	100817749	uncharacterized LOC100817749
gma-u.5	100810227	uncharacterized LOC100810227
gma-u.5	100798622	uncharacterized LOC100798622
sly-u.5	101257658	uncharacterized LOC101257658
sly-u.5	101251130	uncharacterized LOC101251130
bra-r.6	103839195	uncharacterized LOC103839195
bra-r.6	103844351	uncharacterized LOC103844351
bra-r.6	103860430	uncharacterized LOC103860430
vvi-u.5	100243704	uncharacterized LOC100243704
vvi-u.5	100245307	uncharacterized LOC100245307
ppo-u.5	7472695	uncharacterized LOC7472695
ppo-u.5	7490025	uncharacterized LOC7490025
ppo-u.5	18104914	uncharacterized LOC18104914
mtr-u.5	11430613	uncharacterized LOC11430613
mtr-u.5	11439584	uncharacterized LOC11439584
ghi-r.1	107905555	uncharacterized LOC107905555
ghi-r.1	107908913	uncharacterized LOC107908913
ghi-r.1	107928006	uncharacterized LOC107928006
bna-r.1	111204609	uncharacterized LOC111204609
bna-r.1	106361626	uncharacterized LOC106361626
bna-r.1	BNAA03G38860D	uncharacterized BNAA03G38860D
sot-r.1	102581518	uncharacterized LOC102581518
sot-r.1	102603536	uncharacterized LOC102603536
cit-r.1	102610317	uncharacterized LOC102610317
cit-r.1	102617750	uncharacterized LOC102617750
nta-r.1	107761413	uncharacterized LOC107761413
nta-r.1	107798817	uncharacterized LOC107798817
nta-r.1	107794080	uncharacterized LOC107794080
cre-r.1	CHLRE_17g731450v5	uncharacterized protein

Top 50 coexpressed genes to 100834545 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100834545 (bdi-r.1 coexpression data)

CoexMap"100834545"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003577356.1 [sequence] [blastp]
XP_010237552.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto_nucl 4, nucl 3, cyto 3, chlo 1, plas 1, pero 1, cysk 1, chlo_mito 1, cysk_plas 1	(predict for XP_003577356.1)
cyto 4, chlo 2, cyto_pero 2, cyto_E.R. 2	(predict for XP_010237552.1)

Subcellular
localization
TargetP

other 8, mito 6	(predict for XP_003577356.1)
other 8, mito 6	(predict for XP_010237552.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100834545	bdi-r.1 for 100824972	tae-r.2 for 123157389	tae-r.2 for 123120704	tae-r.2 for 123165245	hvu-r.1 for 123443481	hvu-r.1 for 123409091	osa-u.5 for 4350916	osa-u.5 for 4340472	zma-u.5 for 100191550	zma-u.5 for 103637883	zma-u.5 for 100277688	sbi-r.1 for 8070766	sbi-r.1 for 8066734	ath-u.5 for AT2G15695	ath-u.5 for AT5G44250	gma-u.5 for 100817749	gma-u.5 for 100810227	gma-u.5 for 100798622	sly-u.5 for 101257658	sly-u.5 for 101251130	bra-r.6 for 103839195	bra-r.6 for 103844351	bra-r.6 for 103860430	vvi-u.5 for 100243704	vvi-u.5 for 100245307	ppo-u.5 for 7472695	ppo-u.5 for 7490025	ppo-u.5 for 18104914	mtr-u.5 for 11430613	mtr-u.5 for 11439584	ghi-r.1 for 107905555	ghi-r.1 for 107908913	ghi-r.1 for 107928006	bna-r.1 for 111204609	bna-r.1 for 106361626	bna-r.1 for BNAA03G38860D	sot-r.1 for 102581518	sot-r.1 for 102603536	cit-r.1 for 102610317	cit-r.1 for 102617750	nta-r.1 for 107761413	nta-r.1 for 107798817	nta-r.1 for 107794080	cre-r.1 for CHLRE_17g731450v5

Ortholog

Ortholog ID: 2445

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100834545

uncharacterized LOC100824972

uncharacterized LOC123120704

uncharacterized LOC123165245

uncharacterized LOC123111490

uncharacterized LOC123443481

uncharacterized LOC123409091

uncharacterized LOC4350916

uncharacterized LOC4340472

uncharacterized LOC100191550

uncharacterized LOC103637883

uncharacterized LOC100277688

uncharacterized LOC8070766

uncharacterized LOC8066734

peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)

peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53)

uncharacterized LOC100817749

uncharacterized LOC100798622

uncharacterized LOC100791690

uncharacterized LOC101257658

uncharacterized LOC101251130

uncharacterized LOC103839195

uncharacterized LOC103844351

uncharacterized LOC103860430

uncharacterized LOC100243704

uncharacterized LOC100245307

uncharacterized LOC7472695

uncharacterized LOC18104914

uncharacterized LOC18097797

uncharacterized LOC11430613

uncharacterized LOC11439584

uncharacterized LOC107905555

uncharacterized LOC107908913

uncharacterized LOC107916570

uncharacterized LOC111204609

uncharacterized LOC106361626

uncharacterized LOC106445630

uncharacterized LOC102581518

uncharacterized LOC102603536

uncharacterized LOC102610317

uncharacterized LOC102617750

uncharacterized LOC107761413

uncharacterized LOC107798817

uncharacterized LOC107808339

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	5
tae03018	RNA degradation	3
tae04142	Lysosome	3
tae00511	Other glycan degradation	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	5
tae04142	Lysosome	3
tae00511	Other glycan degradation	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00350	Tyrosine metabolism	3
ath00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ath00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	4
ath04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00410	beta-Alanine metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi00640	Propanoate metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi00410	beta-Alanine metabolism	2
ghi00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2
sot01240	Biosynthesis of cofactors	2
sot00562	Inositol phosphate metabolism	2
sot04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	4
nta00260	Glycine, serine and threonine metabolism	3
nta00310	Lysine degradation	3
nta00860	Porphyrin metabolism	2
nta00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	4
nta04070	Phosphatidylinositol signaling system	4
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00260	Glycine, serine and threonine metabolism	3
nta00280	Valine, leucine and isoleucine degradation	3
nta00860	Porphyrin metabolism	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04146	Peroxisome	5
cre00071	Fatty acid degradation	4
cre01212	Fatty acid metabolism	4
cre01200	Carbon metabolism	4
cre00592	alpha-Linolenic acid metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

100834545

100824972

123120704

123165245

123111490

123443481

123409091

4350916

4340472

100191550

103637883

100277688

8070766

8066734

816063

834448

100817749

100798622

100791690

101257658

101251130

103839195

103844351

103860430

100243704

100245307

7472695

18104914

18097797

11430613

11439584

107905555

107908913

107916570

111204609

106361626

106445630

102581518

102603536

102610317

102617750

107761413

107798817

107808339

66057082

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Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	2	3	2	2	3	2	3	2	3	2	3	3	2	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100834545 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100834545 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**