ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100835403	uncharacterized LOC100835403
bdi-r.1	100821340	uncharacterized LOC100821340
tae-r.2	123153483	uncharacterized LOC123153483
tae-r.2	123093726	uncharacterized LOC123093726
tae-r.2	123170553	uncharacterized LOC123170553
hvu-r.1	123448983	uncharacterized LOC123448983
hvu-r.1	123414845	uncharacterized LOC123414845
osa-u.5	4332439	uncharacterized LOC4332439
osa-u.5	4339025	uncharacterized LOC4339025
zma-u.5	103630439	plant-specific domain TIGR01589 family protein expressed
zma-u.5	100284567	uncharacterized LOC100284567
zma-u.5	100282477	plant-specific domain TIGR01589 family protein
sbi-r.1	8081468	uncharacterized LOC8081468
sbi-r.1	8061776	uncharacterized LOC8061776
ath-u.5	AT3G55240	Plant protein 1589 of unknown function
ath-u.5	AT5G02580	argininosuccinate lyase
gma-u.5	102662475	uncharacterized LOC102662475
gma-u.5	100808933	uncharacterized LOC100808933
sly-u.5	101259009	uncharacterized LOC101259009
sly-u.5	101246275	uncharacterized LOC101246275
vvi-u.5	100256772	uncharacterized LOC100256772
ppo-u.5	7491945	uncharacterized LOC7491945
ppo-u.5	18102740	uncharacterized LOC18102740
mtr-u.5	25499304	uncharacterized LOC25499304
ghi-r.1	107899276	uncharacterized LOC107899276
ghi-r.1	107900474	uncharacterized LOC107900474
bna-r.1	106372594	uncharacterized LOC106372594
sot-r.1	102598663	uncharacterized LOC102598663
sot-r.1	102590633	uncharacterized LOC102590633
cit-r.1	102617692	hypothetical protein
cit-r.1	102621417	uncharacterized LOC102621417
nta-r.1	107759891	uncharacterized LOC107759891
nta-r.1	107822603	uncharacterized LOC107822603
nta-r.1	107760496	uncharacterized LOC107760496

Top 50 coexpressed genes to 100835403 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100835403 (bdi-r.1 coexpression data)

CoexMap"100835403"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003568285.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, chlo 2

(predict for XP_003568285.1)

Subcellular
localization
TargetP

other 5, scret 5

(predict for XP_003568285.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100835403	bdi-r.1 for 100821340	tae-r.2 for 123153483	tae-r.2 for 123093726	tae-r.2 for 123170553	hvu-r.1 for 123448983	hvu-r.1 for 123414845	osa-u.5 for 4332439	osa-u.5 for 4339025	zma-u.5 for 103630439	zma-u.5 for 100284567	zma-u.5 for 100282477	sbi-r.1 for 8081468	sbi-r.1 for 8061776	ath-u.5 for AT3G55240	ath-u.5 for AT5G02580	gma-u.5 for 102662475	gma-u.5 for 100808933	sly-u.5 for 101259009	sly-u.5 for 101246275	vvi-u.5 for 100256772	ppo-u.5 for 7491945	ppo-u.5 for 18102740	mtr-u.5 for 25499304	ghi-r.1 for 107899276	ghi-r.1 for 107900474	bna-r.1 for 106372594	sot-r.1 for 102598663	sot-r.1 for 102590633	cit-r.1 for 102617692	cit-r.1 for 102621417	nta-r.1 for 107759891	nta-r.1 for 107822603	nta-r.1 for 107760496

Ortholog

Ortholog ID: 1751

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100835403

uncharacterized LOC100821340

uncharacterized LOC123153483

uncharacterized LOC123093726

uncharacterized LOC123094945

uncharacterized LOC123448983

uncharacterized LOC123414845

uncharacterized LOC4332439

uncharacterized LOC4339025

plant-specific domain TIGR01589 family protein expressed

uncharacterized LOC100284567

plant-specific domain TIGR01589 family protein

uncharacterized LOC8081468

uncharacterized LOC8061776

Plant protein 1589 of unknown function

argininosuccinate lyase

uncharacterized LOC102662475

uncharacterized LOC101259009

uncharacterized LOC101246275

uncharacterized LOC103847438

uncharacterized LOC100256772

uncharacterized LOC100244913

uncharacterized LOC7491945

uncharacterized LOC18102740

uncharacterized LOC107900474

uncharacterized LOC107948872

uncharacterized LOC121218585

uncharacterized LOC106385945

uncharacterized LOC106443013

uncharacterized LOC102598663

uncharacterized LOC102590633

hypothetical protein

uncharacterized LOC102621417

uncharacterized LOC107759891

uncharacterized LOC107822603

uncharacterized LOC107796786

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00196	Photosynthesis - antenna proteins	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00196	Photosynthesis - antenna proteins	7
tae00460	Cyanoamino acid metabolism	2
tae00500	Starch and sucrose metabolism	2
tae00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00196	Photosynthesis - antenna proteins	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00196	Photosynthesis - antenna proteins	7
osa00195	Photosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00860	Porphyrin metabolism	6
zma01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00196	Photosynthesis - antenna proteins	11
ath00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00360	Phenylalanine metabolism	4
sly00270	Cysteine and methionine metabolism	3
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly01250	Biosynthesis of nucleotide sugars	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00250	Alanine, aspartate and glutamate metabolism	2
bra00260	Glycine, serine and threonine metabolism	2
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra01200	Carbon metabolism	2
bra01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	10
ppo00196	Photosynthesis - antenna proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	5
ghi00860	Porphyrin metabolism	2
ghi00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	5
ghi00860	Porphyrin metabolism	2
ghi00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	4
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2
sot00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00511	Other glycan degradation	2
nta00513	Various types of N-glycan biosynthesis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta00531	Glycosaminoglycan degradation	2
nta00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00908	Zeatin biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100835403

100821340

123153483

123093726

123094945

123448983

123414845

4332439

4339025

103630439

100284567

100282477

8081468

8061776

824690

831095

102662475

101259009

101246275

103847438

100256772

100244913

7491945

18102740

107900474

107948872

121218585

106385945

106443013

102598663

102590633

102617692

102621417

107759891

107822603

107796786

The preparation time of this page was 0.3 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	bra
Paralog	2	3	2	2	3	2	2	2	2	1	2	1	2	1	2	2	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100835403 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100835403 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**