ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100839997	calmodulin-3
bdi-r.1	100823371	calmodulin
bdi-r.1	100833425	calmodulin-beta
tae-r.2	123097630	calmodulin-1
tae-r.2	100270651	calmodulin-3
tae-r.2	123060651	calmodulin-2
hvu-r.1	123444155	calmodulin-2
hvu-r.1	123448781	calmodulin-1
hvu-r.1	123443486	calmodulin-1
osa-u.5	4326903	calmodulin-3-like
osa-u.5	4324384	calmodulin
osa-u.5	4332664	calmodulin-1
zma-u.5	100381315	uncharacterized LOC100381315
zma-u.5	542533	calmodulin 2
sbi-r.1	8064169	calmodulin
sbi-r.1	8083705	calmodulin
sbi-r.1	8155375	calmodulin
ath-u.5	CAM5	calmodulin 5
ath-u.5	CAM4	calmodulin 4
ath-u.5	CAM1	calmodulin 1
gma-u.5	SCAM-4	calmodulin
gma-u.5	102666811	calmodulin-1
gma-u.5	100527439	calmodulin
sly-u.5	101257476	calmodulin-like protein 8
sly-u.5	CaM1	calmodulin 1
sly-u.5	CaM3	calmodulin 3
bra-r.6	103868956	calmodulin-like protein 11
bra-r.6	103857966	calmodulin-2
bra-r.6	103856482	calmodulin
vvi-u.5	100232908	calmodulin
vvi-u.5	100261610	calmodulin-7
vvi-u.5	100244152	calmodulin-like protein 11
ppo-u.5	7495660	calmodulin-7
ppo-u.5	7455885	calmodulin-7
ppo-u.5	18094942	calmodulin
mtr-u.5	25482942	calmodulin-like protein 11
mtr-u.5	11431828	calmodulin
mtr-u.5	11436534	calmodulin
ghi-r.1	107930979	calmodulin
ghi-r.1	107927660	calmodulin-like protein 8
ghi-r.1	107902047	calmodulin-7
bna-r.1	125591148	calmodulin-like
bna-r.1	106352780	calmodulin-2
bna-r.1	106386330	calmodulin-1-like
sot-r.1	PCM8	calmodulin-6-like protein
sot-r.1	102594384	calmodulin-like
sot-r.1	102599353	calmodulin
cit-r.1	102630096	calmodulin-like protein 8
cit-r.1	102620326	calmodulin-7-like
nta-r.1	107779518	calmodulin
nta-r.1	107779166	calmodulin-7
nta-r.1	107763754	calmodulin
cre-r.1	CHLRE_03g178150v5	uncharacterized protein

Top 50 coexpressed genes to 100839997 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100839997 (bdi-r.1 coexpression data)

CoexMap"100839997"

[Cytoscape]

Annotation

functional annotation

KEGG

bdi04016 [list] [network] MAPK signaling pathway - plant (145 genes)

bdi04070 [list] [network] Phosphatidylinositol signaling system (64 genes)

bdi04075 [list] [network] Plant hormone signal transduction (363 genes)

bdi04626 [list] [network] Plant-pathogen interaction (204 genes)

GO BP

GO CC

GO MF

GO:0005509 [list] [network] calcium ion binding	(267 genes)	IEA
GO:0030234 [list] [network] enzyme regulator activity	(428 genes)	IEA

Protein

XP_003567308.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 2, cyto 2, mito 2, extr 2, cyto_nucl 2

(predict for XP_003567308.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003567308.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100839997	bdi-r.1 for 100823371	bdi-r.1 for 100833425	tae-r.2 for 123097630	tae-r.2 for 100270651	tae-r.2 for 123060651	hvu-r.1 for 123444155	hvu-r.1 for 123448781	hvu-r.1 for 123443486	osa-u.5 for 4326903	osa-u.5 for 4324384	osa-u.5 for 4332664	zma-u.5 for 100381315	zma-u.5 for 542533	sbi-r.1 for 8064169	sbi-r.1 for 8083705	sbi-r.1 for 8155375	ath-u.5 for CAM5	ath-u.5 for CAM4	ath-u.5 for CAM1	gma-u.5 for SCAM-4	gma-u.5 for 102666811	gma-u.5 for 100527439	sly-u.5 for 101257476	sly-u.5 for CaM1	sly-u.5 for CaM3	bra-r.6 for 103868956	bra-r.6 for 103857966	bra-r.6 for 103856482	vvi-u.5 for 100232908	vvi-u.5 for 100261610	vvi-u.5 for 100244152	ppo-u.5 for 7495660	ppo-u.5 for 7455885	ppo-u.5 for 18094942	mtr-u.5 for 25482942	mtr-u.5 for 11431828	mtr-u.5 for 11436534	ghi-r.1 for 107930979	ghi-r.1 for 107927660	ghi-r.1 for 107902047	bna-r.1 for 125591148	bna-r.1 for 106352780	bna-r.1 for 106386330	sot-r.1 for PCM8	sot-r.1 for 102594384	sot-r.1 for 102599353	cit-r.1 for 102630096	cit-r.1 for 102620326	nta-r.1 for 107779518	nta-r.1 for 107779166	nta-r.1 for 107763754	cre-r.1 for CHLRE_03g178150v5

Ortholog

Ortholog ID: 310

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

CAM5

CAM3

CAM2

CaM5

Function^*

calmodulin-3

calmodulin

calmodulin-beta

calmodulin-1

calmodulin-3

calmodulin-1

calmodulin-3

calmodulin

calmodulin-1

uncharacterized LOC100381315

calmodulin 2

uncharacterized LOC100217114

calmodulin

calmodulin 5

calmodulin 3

calmodulin 2

calmodulin-1

calmodulin

EF hand calcium-binding family protein

calmodulin-like protein 8

calmodulin 5

calmodulin 4

calmodulin-like protein 11

calmodulin-2

calmodulin

calmodulin-like protein 11

calmodulin-like

calmodulin

calmodulin-7

calmodulin

calmodulin-1

calmodulin-7

calmodulin

calmodulin-7

calmodulin

calmodulin-2/4

calmodulin

calmodulin-like

calmodulin

calmodulin-7

calmodulin-7-like

calmodulin-7

calmodulin

calmodulin-7

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03060	Protein export	5
bdi00510	N-Glycan biosynthesis	5
bdi00513	Various types of N-glycan biosynthesis	5
bdi04141	Protein processing in endoplasmic reticulum	5
bdi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi03060	Protein export	2
bdi04016	MAPK signaling pathway - plant	2
bdi04070	Phosphatidylinositol signaling system	2
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00910	Nitrogen metabolism	3
bdi01310	Nitrogen cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	6
tae00020	Citrate cycle (TCA cycle)	5
tae01210	2-Oxocarboxylic acid metabolism	5
tae01230	Biosynthesis of amino acids	3
tae04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04070	Phosphatidylinositol signaling system	3
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04070	Phosphatidylinositol signaling system	3
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3
tae03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	3
hvu00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	8
osa04144	Endocytosis	3
osa04016	MAPK signaling pathway - plant	3
osa04070	Phosphatidylinositol signaling system	3
osa04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa00240	Pyrimidine metabolism	2
osa01232	Nucleotide metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	6
zma04070	Phosphatidylinositol signaling system	6
zma04075	Plant hormone signal transduction	6
zma04626	Plant-pathogen interaction	6
zma03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	5
zma04070	Phosphatidylinositol signaling system	5
zma04075	Plant hormone signal transduction	5
zma04626	Plant-pathogen interaction	5
zma04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	8
zma04070	Phosphatidylinositol signaling system	8
zma04075	Plant hormone signal transduction	8
zma04626	Plant-pathogen interaction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3
sbi04016	MAPK signaling pathway - plant	3
sbi04070	Phosphatidylinositol signaling system	3
sbi04075	Plant hormone signal transduction	3
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	4
sbi04016	MAPK signaling pathway - plant	3
sbi04070	Phosphatidylinositol signaling system	3
sbi04075	Plant hormone signal transduction	3
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	6
sbi04016	MAPK signaling pathway - plant	3
sbi04070	Phosphatidylinositol signaling system	3
sbi04075	Plant hormone signal transduction	3
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	5
ath04016	MAPK signaling pathway - plant	4
ath04070	Phosphatidylinositol signaling system	4
ath04075	Plant hormone signal transduction	4
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04075	Plant hormone signal transduction	3
ath04626	Plant-pathogen interaction	3
ath04016	MAPK signaling pathway - plant	2
ath04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04075	Plant hormone signal transduction	4
ath04626	Plant-pathogen interaction	4
ath00190	Oxidative phosphorylation	4
ath00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04070	Phosphatidylinositol signaling system	4
gma04075	Plant hormone signal transduction	4
gma04626	Plant-pathogen interaction	4
gma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	3
gma04070	Phosphatidylinositol signaling system	3
gma04075	Plant hormone signal transduction	3
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly02010	ABC transporters	2
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly04016	MAPK signaling pathway - plant	2
sly00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	5
sly00190	Oxidative phosphorylation	4
sly04142	Lysosome	4
sly04145	Phagosome	4
sly04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	5
sly04142	Lysosome	5
sly04145	Phagosome	5
sly04626	Plant-pathogen interaction	4
sly04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	5
bra04016	MAPK signaling pathway - plant	3
bra04070	Phosphatidylinositol signaling system	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra04070	Phosphatidylinositol signaling system	4
bra04075	Plant hormone signal transduction	4
bra04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04626	Plant-pathogen interaction	3
ppo04144	Endocytosis	3
ppo03013	Nucleocytoplasmic transport	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	4
ppo04145	Phagosome	2
ppo04016	MAPK signaling pathway - plant	2
ppo04070	Phosphatidylinositol signaling system	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo03040	Spliceosome	2
ppo03010	Ribosome	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	7
mtr04626	Plant-pathogen interaction	4
mtr04144	Endocytosis	3
mtr04016	MAPK signaling pathway - plant	3
mtr04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	7
mtr04145	Phagosome	7
mtr04626	Plant-pathogen interaction	4
mtr04142	Lysosome	4
mtr04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	5
mtr04070	Phosphatidylinositol signaling system	4
mtr04075	Plant hormone signal transduction	4
mtr04626	Plant-pathogen interaction	4
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	6
ghi04016	MAPK signaling pathway - plant	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04070	Phosphatidylinositol signaling system	4
ghi04075	Plant hormone signal transduction	4
ghi04626	Plant-pathogen interaction	4
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	6
ghi04070	Phosphatidylinositol signaling system	6
ghi04075	Plant hormone signal transduction	6
ghi04626	Plant-pathogen interaction	6
ghi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04070	Phosphatidylinositol signaling system	6
bna04075	Plant hormone signal transduction	6
bna04626	Plant-pathogen interaction	6
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	9
bna04070	Phosphatidylinositol signaling system	9
bna04075	Plant hormone signal transduction	9
bna04626	Plant-pathogen interaction	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	9
bna04070	Phosphatidylinositol signaling system	9
bna04075	Plant hormone signal transduction	9
bna04626	Plant-pathogen interaction	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	7
sot04070	Phosphatidylinositol signaling system	7
sot04075	Plant hormone signal transduction	7
sot04626	Plant-pathogen interaction	7
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	4
sot04070	Phosphatidylinositol signaling system	4
sot04075	Plant hormone signal transduction	4
sot04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	2
cit00190	Oxidative phosphorylation	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2
nta04070	Phosphatidylinositol signaling system	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04070	Phosphatidylinositol signaling system	8
nta04075	Plant hormone signal transduction	8
nta04626	Plant-pathogen interaction	8
nta04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04070	Phosphatidylinositol signaling system	8
nta04075	Plant hormone signal transduction	8
nta04626	Plant-pathogen interaction	8
nta04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04814	Motor proteins	3

Expression

Expression pattern

Entrez Gene ID^*

100839997

100823371

100833425

543242

543239

123069711

123443486

123443542

123444658

4324384

4332664

100381315

542533

100217114

8064169

8083705

8155375

817245

824847

818710

102666811

100527439

100500308

101257476

101249621

101243958

103868956

103863085

103841572

100232908

100244152

100260795

18094942

7489303

7454011

11431828

25480533

11414942

107930979

107902047

121204830

106446345

106396955

106435081

102594384

102577507

102579473

102620326

102610294

107763754

107775488

107820061

5728821

The preparation time of this page was 0.1 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	3	3	2	3	3	3	3	3	3	3	3	3	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100839997 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100839997 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**