ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100844028	nuclear transcription factor Y subunit A-7
bdi-r.1	100842793	nuclear transcription factor Y subunit A-7
tae-r.2	543152	nuclear transcription factor Y subunit A-7
tae-r.2	123119379	nuclear transcription factor Y subunit A-7
tae-r.2	123102190	nuclear transcription factor Y subunit A-7
hvu-r.1	123396343	nuclear transcription factor Y subunit A-7
hvu-r.1	123449586	nuclear transcription factor Y subunit A-7-like
osa-u.5	4352778	nuclear transcription factor Y subunit A-7
osa-u.5	4344874	nuclear transcription factor Y subunit A-4
zma-u.5	100194365	uncharacterized LOC100194365
zma-u.5	100284857	uncharacterized LOC100284857
zma-u.5	100383246	uncharacterized LOC100383246
sbi-r.1	8070158	nuclear transcription factor Y subunit A-7
sbi-r.1	8059799	nuclear transcription factor Y subunit A-7
ath-u.5	NF-YA4	nuclear factor Y, subunit A4
ath-u.5	NF-YA7	nuclear factor Y, subunit A7
gma-u.5	100499754	putative CCAAT-binding transcription factor
gma-u.5	NF-YA08	nuclear transcription factor Y subunit A-8
gma-u.5	NF-YA04	nuclear transcription factor Y subunit A-4
sly-u.5	101260988	nuclear transcription factor Y subunit A-7
bra-r.6	103832749	nuclear transcription factor Y subunit A-5
bra-r.6	103840389	nuclear transcription factor Y subunit A-7
bra-r.6	103867423	nuclear transcription factor Y subunit A-4
vvi-u.5	100249692	nuclear transcription factor Y subunit A-7
ppo-u.5	7487567	nuclear transcription factor Y subunit A-7
ppo-u.5	18103293	nuclear transcription factor Y subunit A-7
mtr-u.5	11413865	nuclear transcription factor Y subunit A-7
ghi-r.1	107930306	nuclear transcription factor Y subunit A-7
ghi-r.1	107958516	nuclear transcription factor Y subunit A-7
ghi-r.1	107906314	nuclear transcription factor Y subunit A-7
bna-r.1	106407676	nuclear transcription factor Y subunit A-7
bna-r.1	125600621	nuclear transcription factor Y subunit A-4-like
sot-r.1	102579930	nuclear transcription factor Y subunit A-7-like
sot-r.1	102600275	nuclear transcription factor Y subunit A-7
cit-r.1	102608084	nuclear transcription factor Y subunit A-7
nta-r.1	107821024	uncharacterized LOC107821024
nta-r.1	107807858	nuclear transcription factor Y subunit A-7-like
nta-r.1	107787566	nuclear transcription factor Y subunit A-7

Top 50 coexpressed genes to 100844028 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100844028 (bdi-r.1 coexpression data)

CoexMap"100844028"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(365 genes)

IEA

GO CC

GO:0016602 [list] [network] CCAAT-binding factor complex

(18 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(205 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(256 genes)	IEA

Protein

XP_010237027.1 [sequence] [blastp]
XP_010237028.1 [sequence] [blastp]
XP_010237029.1 [sequence] [blastp]
XP_024319080.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_010237027.1)
nucl 10	(predict for XP_010237028.1)
nucl 9, cyto 1, plas 1, cyto_plas 1	(predict for XP_010237029.1)
nucl 10	(predict for XP_024319080.1)

Subcellular
localization
TargetP

other 9	(predict for XP_010237027.1)
other 9	(predict for XP_010237028.1)
other 9	(predict for XP_010237029.1)
other 9	(predict for XP_024319080.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100844028	bdi-r.1 for 100842793	tae-r.2 for 543152	tae-r.2 for 123119379	tae-r.2 for 123102190	hvu-r.1 for 123396343	hvu-r.1 for 123449586	osa-u.5 for 4352778	osa-u.5 for 4344874	zma-u.5 for 100194365	zma-u.5 for 100284857	zma-u.5 for 100383246	sbi-r.1 for 8070158	sbi-r.1 for 8059799	ath-u.5 for NF-YA4	ath-u.5 for NF-YA7	gma-u.5 for 100499754	gma-u.5 for NF-YA08	gma-u.5 for NF-YA04	sly-u.5 for 101260988	bra-r.6 for 103832749	bra-r.6 for 103840389	bra-r.6 for 103867423	vvi-u.5 for 100249692	ppo-u.5 for 7487567	ppo-u.5 for 18103293	mtr-u.5 for 11413865	ghi-r.1 for 107930306	ghi-r.1 for 107958516	ghi-r.1 for 107906314	bna-r.1 for 106407676	bna-r.1 for 125600621	sot-r.1 for 102579930	sot-r.1 for 102600275	cit-r.1 for 102608084	nta-r.1 for 107821024	nta-r.1 for 107807858	nta-r.1 for 107787566

Ortholog

Ortholog ID: 3914

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

NF-YA4

NF-YA7

LOC100499754

NF-YA04

NF-YA16

Function^*