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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100844515   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 bdi-r.1   100845328   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 bdi-r.1   100840411   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 tae-r.2   123085497   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 tae-r.2   123090984   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 tae-r.2   123086989   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 hvu-r.1   123449823   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 hvu-r.1   123448975   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 hvu-r.1   123447668   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 osa-u.5   4332447   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 osa-u.5   4333998   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 osa-u.5   4337647   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 zma-u.5   100192002   uncharacterized LOC100192002 
 zma-u.5   103643958   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 zma-u.5   103639290   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 sbi-r.1   8067356   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 sbi-r.1   8060530   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 sbi-r.1   8084900   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 ath-u.5   ECA2   ER-type Ca2+-ATPase 2 
 ath-u.5   ECA4   endomembrane-type CA-ATPase 4 
 ath-u.5   ECA1   ER-type Ca2+-ATPase 1 
 gma-u.5   100783509   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 gma-u.5   100812151   calcium-transporting ATPase 1, endoplasmic reticulum-type 
 gma-u.5   100800498   calcium-transporting ATPase, endoplasmic reticulum-type 
 sly-u.5   101256303   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 sly-u.5   101257236   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 sly-u.5   LCA1   Ca2+-ATPase 
 bra-r.6   103871788   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 bra-r.6   103843530   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 vvi-u.5   100253574   calcium-transporting ATPase, endoplasmic reticulum-type 
 vvi-u.5   100266003   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 vvi-u.5   100248326   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 ppo-u.5   7488861   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 ppo-u.5   7486789   calcium-transporting ATPase, endoplasmic reticulum-type 
 ppo-u.5   18095022   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 mtr-u.5   25489978   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 mtr-u.5   11439860   calcium-transporting ATPase, endoplasmic reticulum-type 
 mtr-u.5   11420948   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 ghi-r.1   107954443   calcium-transporting ATPase, endoplasmic reticulum-type 
 ghi-r.1   107952973   calcium-transporting ATPase, endoplasmic reticulum-type 
 ghi-r.1   107950299   calcium-transporting ATPase 1, endoplasmic reticulum-type 
 bna-r.1   106452921   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 bna-r.1   106436319   calcium-transporting ATPase 2, endoplasmic reticulum-type 
 bna-r.1   106419983   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 sot-r.1   102605714   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 sot-r.1   102595434   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 sot-r.1   102591952   calcium-transporting ATPase, endoplasmic reticulum-type 
 cit-r.1   102611583   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 cit-r.1   102610538   calcium-transporting ATPase, endoplasmic reticulum-type 
 cit-r.1   102614973   calcium-transporting ATPase 1, endoplasmic reticulum-type-like 
 nta-r.1   107781299   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 nta-r.1   107799945   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 nta-r.1   107801276   calcium-transporting ATPase, endoplasmic reticulum-type 
 cre-r.1   CHLRE_05g242350v5   uncharacterized protein 
 cre-r.1   CHLRE_11g467795v5   uncharacterized protein 

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Top 50 coexpressed genes to 100844515 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100844515 (bdi-r.1 coexpression data)

CoexMap"100844515"


bdiLOC100844515 | Entrez gene ID : 100844515      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 3 3 3 3 3 3 3 2 3 3 3 3 3 3 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi04148 [list] [network] Efferocytosis (53 genes)
GO BP
GO:0006874 [list] [network] intracellular calcium ion homeostasis  (30 genes)  IEA  
GO:0070588 [list] [network] calcium ion transmembrane transport  (36 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3014 genes)  IEA  
GO MF
GO:0005388 [list] [network] P-type calcium transporter activity  (14 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (417 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1995 genes)  IEA  
Protein XP_003560240.1 [sequence] [blastp]
XP_010230478.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_003560240.1)
plas 7,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_010230478.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003560240.1)
other 8  (predict for XP_010230478.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100844515
bdi-r.1
for
100845328
bdi-r.1
for
100840411
tae-r.2
for
123085497
tae-r.2
for
123090984
tae-r.2
for
123086989
hvu-r.1
for
123449823
hvu-r.1
for
123448975
hvu-r.1
for
123447668
osa-u.5
for
4332447
osa-u.5
for
4333998
osa-u.5
for
4337647
zma-u.5
for
100192002
zma-u.5
for
103643958
zma-u.5
for
103639290
sbi-r.1
for
8067356
sbi-r.1
for
8060530
sbi-r.1
for
8084900
ath-u.5
for
ECA2
ath-u.5
for
ECA4
ath-u.5
for
ECA1
gma-u.5
for
100783509
gma-u.5
for
100812151
gma-u.5
for
100800498
sly-u.5
for
101256303
sly-u.5
for
101257236
sly-u.5
for
LCA1
bra-r.6
for
103871788
bra-r.6
for
103843530
vvi-u.5
for
100253574
vvi-u.5
for
100266003
vvi-u.5
for
100248326
ppo-u.5
for
7488861
ppo-u.5
for
7486789
ppo-u.5
for
18095022
mtr-u.5
for
25489978
mtr-u.5
for
11439860
mtr-u.5
for
11420948
ghi-r.1
for
107954443
ghi-r.1
for
107952973
ghi-r.1
for
107950299
bna-r.1
for
106452921
bna-r.1
for
106436319
bna-r.1
for
106419983
sot-r.1
for
102605714
sot-r.1
for
102595434
sot-r.1
for
102591952
cit-r.1
for
102611583
cit-r.1
for
102610538
cit-r.1
for
102614973
nta-r.1
for
107781299
nta-r.1
for
107799945
nta-r.1
for
107801276
cre-r.1
for
CHLRE_05g242350v5
cre-r.1
for
CHLRE_11g467795v5


Ortholog ID: 1022
Species bdi bdi bdi tae tae tae hvu hvu hvu osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre cre
Symbol LOC100844515 LOC100845328 LOC100840411 LOC123090984 LOC123092543 LOC123180083 LOC123449823 LOC123448975 LOC123447668 LOC4332447 LOC4333998 LOC4337647 LOC100192002 LOC103643958 LOC103635958 LOC8067356 LOC8060530 LOC8084900 ECA2 ECA4 ECA3 LOC100812151 LOC100792952 LOC100788807 LOC101256303 LOC101257236 LCA1 LOC103871788 LOC103836850 LOC100266003 LOC100248326 LOC100243325 LOC7488861 LOC7486789 LOC7472652 LOC25489978 LOC11439860 LOC11420948 LOC107954443 LOC107952973 LOC107932929 LOC106419983 LOC106419981 LOC106350609 LOC102605714 LOC102595434 LOC102591952 LOC102611583 LOC102610538 LOC127900968 LOC107799945 LOC107814435 LOC107817505 CHLRE_05g242350v5 CHLRE_11g467795v5
Function* calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like calcium-transporting ATPase 4, endoplasmic reticulum-type-like calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type uncharacterized LOC100192002 calcium-transporting ATPase 3, endoplasmic reticulum-type uncharacterized LOC103635958 calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type ER-type Ca2+-ATPase 2 endomembrane-type CA-ATPase 4 endoplasmic reticulum-type calcium-transporting ATPase 3 calcium-transporting ATPase 1, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like Ca2+-ATPase calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 2, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase 1, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type-like calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 4
bdi04144 Endocytosis 3
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 3
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae03018 RNA degradation 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 10
hvu03060 Protein export 3
hvu04144 Endocytosis 3
hvu04145 Phagosome 3
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03018 RNA degradation 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00190 Oxidative phosphorylation 5
zma04145 Phagosome 5
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00071 Fatty acid degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04148 Efferocytosis 2
sbi04517 IgSF CAM signaling 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04120 Ubiquitin mediated proteolysis 2
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath01230 Biosynthesis of amino acids 6
ath00010 Glycolysis / Gluconeogenesis 5
ath00710 Carbon fixation by Calvin cycle 3
ath00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 15
ath04145 Phagosome 5
ath03060 Protein export 3
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 8
ath00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00020 Citrate cycle (TCA cycle) 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00410 beta-Alanine metabolism 2
vvi00640 Propanoate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 7
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo04142 Lysosome 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo04626 Plant-pathogen interaction 3
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 6
ppo03250 Viral life cycle - HIV-1 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 9
cre03018 RNA degradation 2
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100844515 100845328 100840411 123090984 123092543 123180083 123449823 123448975 123447668 4332447 4333998 4337647 100192002 103643958 103635958 8067356 8060530 8084900 827984 837280 837550 100812151 100792952 100788807 101256303 101257236 543554 103871788 103836850 100266003 100248326 100243325 7488861 7486789 7472652 25489978 11439860 11420948 107954443 107952973 107932929 106419983 106419981 106350609 102605714 102595434 102591952 102611583 102610538 127900968 107799945 107814435 107817505 5726453 5725079
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