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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100846695   mediator of RNA polymerase II transcription subunit 27 
 tae-r.2   123078103   mediator of RNA polymerase II transcription subunit 27 
 tae-r.2   123069618   mediator of RNA polymerase II transcription subunit 27 
 tae-r.2   123061030   mediator of RNA polymerase II transcription subunit 27 
 hvu-r.1   123443454   mediator of RNA polymerase II transcription subunit 27 
 osa-u.5   4326197   mediator of RNA polymerase II transcription subunit 27 
 zma-u.5   100193632   uncharacterized LOC100193632 
 zma-u.5   100274560   Mediator of RNA polymerase II transcription subunit 27 
 sbi-r.1   8074500   mediator of RNA polymerase II transcription subunit 27 
 ath-u.5   AT3G09180   mediator of RNA polymerase II transcription subunit 
 gma-u.5   100796886   mediator of RNA polymerase II transcription subunit 27 
 gma-u.5   100782776   mediator of RNA polymerase II transcription subunit 27 
 sly-u.5   101247160   mediator of RNA polymerase II transcription subunit 27 
 bra-r.6   103870565   mediator of RNA polymerase II transcription subunit 27 
 bra-r.6   103859315   mediator of RNA polymerase II transcription subunit 27 
 vvi-u.5   100258667   mediator of RNA polymerase II transcription subunit 27 
 ppo-u.5   7488095   mediator of RNA polymerase II transcription subunit 27 
 mtr-u.5   25499482   mediator of RNA polymerase II transcription subunit 27 
 ghi-r.1   107928222   mediator of RNA polymerase II transcription subunit 27 
 ghi-r.1   107925683   mediator of RNA polymerase II transcription subunit 27 
 bna-r.1   111215799   mediator of RNA polymerase II transcription subunit 27 
 bna-r.1   106352990   mediator of RNA polymerase II transcription subunit 27 
 bna-r.1   106401295   mediator of RNA polymerase II transcription subunit 27 
 sot-r.1   102590084   mediator of RNA polymerase II transcription subunit 27 
 cit-r.1   102624786   mediator of RNA polymerase II transcription subunit 27 
 nta-r.1   107830769   mediator of RNA polymerase II transcription subunit 27 
 nta-r.1   107767511   mediator of RNA polymerase II transcription subunit 27-like 
 cre-r.1   CHLRE_12g510750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100846695 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100846695 (bdi-r.1 coexpression data)

CoexMap"100846695"


bdiLOC100846695 | Entrez gene ID : 100846695    
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 1 1 2 1 2 1 1 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (365 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (34 genes)  IEA  
GO MF
GO:0003713 [list] [network] transcription coactivator activity  (32 genes)  IEA  
Protein XP_003565621.3 [sequence] [blastp]
XP_024314247.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  E.R. 1,  cyto_mito 1  (predict for XP_003565621.3)
chlo 4,  mito 3,  E.R. 1,  cyto_mito 1  (predict for XP_024314247.1)
Subcellular
localization
TargetP
other 4,  chlo 3  (predict for XP_003565621.3)
other 4,  chlo 3  (predict for XP_024314247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100846695
tae-r.2
for
123078103
tae-r.2
for
123069618
tae-r.2
for
123061030
hvu-r.1
for
123443454
osa-u.5
for
4326197
zma-u.5
for
100193632
zma-u.5
for
100274560
sbi-r.1
for
8074500
ath-u.5
for
AT3G09180
gma-u.5
for
100796886
gma-u.5
for
100782776
sly-u.5
for
101247160
bra-r.6
for
103870565
bra-r.6
for
103859315
vvi-u.5
for
100258667
ppo-u.5
for
7488095
mtr-u.5
for
25499482
ghi-r.1
for
107928222
ghi-r.1
for
107925683
bna-r.1
for
111215799
bna-r.1
for
106352990
bna-r.1
for
106401295
sot-r.1
for
102590084
cit-r.1
for
102624786
nta-r.1
for
107830769
nta-r.1
for
107767511
cre-r.1
for
CHLRE_12g510750v5


Ortholog ID: 7988
Species bdi tae tae tae hvu osa zma zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100846695 LOC123078103 LOC123069618 LOC123061030 LOC123443454 LOC4326197 LOC100193632 LOC100274560 LOC8074500 AT3G09180 LOC100796886 LOC100782776 LOC101247160 LOC103870565 LOC103859315 LOC100258667 LOC7488095 LOC25499482 LOC107928222 LOC107925683 LOC106352990 LOC106401295 LOC106439220 LOC102590084 LOC102624786 LOC107830769 LOC107767511 CHLRE_12g510750v5
Function* mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 uncharacterized LOC100193632 Mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27-like mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27 mediator of RNA polymerase II transcription subunit 27-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 9
bdi03082 ATP-dependent chromatin remodeling 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03040 Spliceosome 3
tae03050 Proteasome 3
tae03013 Nucleocytoplasmic transport 2
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
tae03050 Proteasome 7
tae03013 Nucleocytoplasmic transport 6
tae03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00071 Fatty acid degradation 2
hvu00280 Valine, leucine and isoleucine degradation 2
hvu01212 Fatty acid metabolism 2
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
sbi03420 Nucleotide excision repair 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00190 Oxidative phosphorylation 4
bra00260 Glycine, serine and threonine metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
ppo03018 RNA degradation 2
ppo00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 6
nta04626 Plant-pathogen interaction 6
nta03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 6
nta04626 Plant-pathogen interaction 6
nta03082 ATP-dependent chromatin remodeling 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100846695 123078103 123069618 123061030 123443454 4326197 100193632 100274560 8074500 820074 100796886 100782776 101247160 103870565 103859315 100258667 7488095 25499482 107928222 107925683 106352990 106401295 106439220 102590084 102624786 107830769 107767511 5716572
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