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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100846874   nuclear transcription factor Y subunit A-4 
 tae-r.2   123095784   nuclear transcription factor Y subunit A-7 
 tae-r.2   123090770   nuclear transcription factor Y subunit A-7 
 tae-r.2   123087187   nuclear transcription factor Y subunit A-7 
 hvu-r.1   123447281   nuclear transcription factor Y subunit A-7-like 
 osa-u.5   4333806   nuclear transcription factor Y subunit A-9 
 zma-u.5   100282719   uncharacterized LOC100282719 
 sbi-r.1   110430629   nuclear transcription factor Y subunit A-1-like 
 gma-u.5   NF-YA11   nuclear transcription factor Y subunit A-11 
 gma-u.5   NF-YA13   nuclear transcription factor Y subunit A-13 
 sly-u.5   101247462   nuclear transcription factor Y subunit A-9 
 vvi-u.5   100248239   nuclear transcription factor Y subunit A-1 
 ppo-u.5   7480078   nuclear transcription factor Y subunit A-1 
 ppo-u.5   7467333   nuclear transcription factor Y subunit A-7 
 mtr-u.5   25501058   nuclear transcription factor Y subunit A-4 
 ghi-r.1   107900751   nuclear transcription factor Y subunit A-4 
 ghi-r.1   107938342   nuclear transcription factor Y subunit A-4 
 ghi-r.1   107950640   nuclear transcription factor Y subunit A-1 
 sot-r.1   102589526   nuclear transcription factor Y subunit A-7-like 
 cit-r.1   102616312   nuclear transcription factor Y subunit A-4-like 
 nta-r.1   107830770   uncharacterized LOC107830770 
 nta-r.1   107768790   nuclear transcription factor Y subunit A-9 

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Top 50 coexpressed genes to 100846874 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100846874 (bdi-r.1 coexpression data)

CoexMap"100846874"


bdiLOC100846874 | Entrez gene ID : 100846874      
Species bdi tae hvu osa zma sbi gma sly vvi ppo mtr ghi sot cit nta bra cre ath bna
Paralog 1 3 1 1 1 1 2 1 1 2 1 3 1 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (365 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (18 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (205 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (256 genes)  IEA  
Protein XP_003560983.1 [sequence] [blastp]
XP_010231280.1 [sequence] [blastp]
XP_014752975.1 [sequence] [blastp]
XP_014752976.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003560983.1)
nucl 9  (predict for XP_010231280.1)
nucl 9  (predict for XP_014752975.1)
nucl 9  (predict for XP_014752976.1)
Subcellular
localization
TargetP
other 6  (predict for XP_003560983.1)
other 6  (predict for XP_010231280.1)
other 6  (predict for XP_014752975.1)
other 6  (predict for XP_014752976.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100846874
tae-r.2
for
123095784
tae-r.2
for
123090770
tae-r.2
for
123087187
hvu-r.1
for
123447281
osa-u.5
for
4333806
zma-u.5
for
100282719
sbi-r.1
for
110430629
gma-u.5
for
NF-YA11
gma-u.5
for
NF-YA13
sly-u.5
for
101247462
vvi-u.5
for
100248239
ppo-u.5
for
7480078
ppo-u.5
for
7467333
mtr-u.5
for
25501058
ghi-r.1
for
107900751
ghi-r.1
for
107938342
ghi-r.1
for
107950640
sot-r.1
for
102589526
cit-r.1
for
102616312
nta-r.1
for
107830770
nta-r.1
for
107768790


Ortholog ID: 11874
Species bdi tae tae tae hvu osa zma sbi gma gma sly vvi ppo ppo mtr ghi ghi ghi sot cit nta nta
Symbol LOC100846874 LOC123095784 LOC123090770 LOC123087187 LOC123447281 LOC4333806 LOC100282719 LOC110430629 NF-YA11 NF-YA13 LOC101247462 LOC100248239 LOC7480078 LOC7467333 LOC25501058 LOC107900751 LOC107938342 LOC107950640 LOC102589526 LOC102616312 LOC107830770 LOC107768790
Function* nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-9 uncharacterized LOC100282719 nuclear transcription factor Y subunit A-1-like nuclear transcription factor Y subunit A-11 nuclear transcription factor Y subunit A-13 nuclear transcription factor Y subunit A-9 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-7 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-4 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-7-like nuclear transcription factor Y subunit A-4-like uncharacterized LOC107830770 nuclear transcription factor Y subunit A-9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 2
tae00620 Pyruvate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr00071 Fatty acid degradation 2
mtr00410 beta-Alanine metabolism 2
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100846874 123095784 123090770 123087187 123447281 4333806 100282719 110430629 100782085 100789738 101247462 100248239 7480078 7467333 25501058 107900751 107938342 107950640 102589526 102616312 107830770 107768790
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