ATTED-II : GeneCoexpression result

Species	Gene	Description
cit-r.1	102608498	uncharacterized LOC102608498
ath-u.5	AT5G53045	transcription factor
bra-r.6	103847756	EKC/KEOPS complex subunit LAGE3-like
bra-r.6	103857106	EKC/KEOPS complex subunit LAGE3
ghi-r.1	107890771	uncharacterized LOC107890771
ghi-r.1	107930173	uncharacterized LOC107930173
bna-r.1	106443378	EKC/KEOPS complex subunit LAGE3-like
gma-u.5	100811814	uncharacterized LOC100811814
gma-u.5	100527271	transcription factor Pcc1 domain-containing protein
vvi-u.5	100250448	uncharacterized LOC100250448
ppo-u.5	7496405	uncharacterized LOC7496405
ppo-u.5	7475179	uncharacterized LOC7475179
mtr-u.5	11437336	uncharacterized LOC11437336
mtr-u.5	11423169	uncharacterized LOC11423169
sly-u.5	101260703	uncharacterized LOC101260703
sot-r.1	102598177	uncharacterized LOC102598177
nta-r.1	107773017	uncharacterized LOC107773017
nta-r.1	107775663	uncharacterized LOC107775663
osa-u.5	4346149	uncharacterized LOC4346149
osa-u.5	9266043	uncharacterized LOC9266043
osa-u.5	9272617	uncharacterized LOC9272617
zma-u.5	100276896	uncharacterized LOC100276896
tae-r.2	123054591	uncharacterized LOC123054591
tae-r.2	123042107	uncharacterized LOC123042107
hvu-r.1	123427806	uncharacterized LOC123427806
sbi-r.1	8072117	uncharacterized LOC8072117
bdi-r.1	100846775	uncharacterized LOC100846775

Annotation

functional annotation

KEGG

GO BP

GO:0070525 [list] [network] tRNA threonylcarbamoyladenosine metabolic process

(5 genes)

IEA

GO CC

GO:0000408 [list] [network] EKC/KEOPS complex

(5 genes)

IEA

GO MF

Protein

XP_052294879.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 2, chlo_mito 2, nucl 1, mito 1, cyto_plas 1

(predict for XP_052294879.1)

Subcellular
localization
TargetP

other 8

(predict for XP_052294879.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cit-r.1 for 102608498	ath-u.5 for AT5G53045	bra-r.6 for 103847756	bra-r.6 for 103857106	ghi-r.1 for 107890771	ghi-r.1 for 107930173	bna-r.1 for 106443378	gma-u.5 for 100811814	gma-u.5 for 100527271	vvi-u.5 for 100250448	ppo-u.5 for 7496405	ppo-u.5 for 7475179	mtr-u.5 for 11437336	mtr-u.5 for 11423169	sly-u.5 for 101260703	sot-r.1 for 102598177	nta-r.1 for 107773017	nta-r.1 for 107775663	osa-u.5 for 4346149	osa-u.5 for 9266043	osa-u.5 for 9272617	zma-u.5 for 100276896	tae-r.2 for 123054591	tae-r.2 for 123042107	hvu-r.1 for 123427806	sbi-r.1 for 8072117	bdi-r.1 for 100846775

Ortholog

Ortholog ID: 7375

Species

cit

ath

bra

ghi

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC102608498

transcription factor

EKC/KEOPS complex subunit LAGE3-like

EKC/KEOPS complex subunit LAGE3

uncharacterized LOC107890771

uncharacterized LOC107930173

EKC/KEOPS complex subunit LAGE3-like

uncharacterized LOC100811814

transcription factor Pcc1 domain-containing protein

uncharacterized LOC100250448

uncharacterized LOC7496405

uncharacterized LOC7475179

uncharacterized LOC11437336

uncharacterized LOC11423169

uncharacterized LOC101260703

uncharacterized LOC102598177

uncharacterized LOC107773017

uncharacterized LOC107775663

uncharacterized LOC4346149

uncharacterized LOC9266043

uncharacterized LOC9272617

uncharacterized LOC100276896

uncharacterized LOC123054591

uncharacterized LOC123042107

uncharacterized LOC123427806

uncharacterized LOC8072117

uncharacterized LOC100846775

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5
cit03050	Proteasome	4
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	8
ghi03010	Ribosome	2
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	9
ghi03010	Ribosome	3
ghi03018	RNA degradation	2
ghi04145	Phagosome	2
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7
bna04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	16
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5
ppo03018	RNA degradation	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03440	Homologous recombination	2
ppo03010	Ribosome	2
ppo04016	MAPK signaling pathway - plant	2
ppo03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr03040	Spliceosome	3
mtr03420	Nucleotide excision repair	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	5
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	8
sot03018	RNA degradation	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03020	RNA polymerase	2
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	4
osa03010	Ribosome	3
osa03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	8
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03420	Nucleotide excision repair	3
bdi03030	DNA replication	2

Expression

Expression pattern

Entrez Gene ID^*

102608498

835384

103847756

103857106

107890771

107930173

106443378

100811814

100527271

100250448

7496405

7475179

11437336

11423169

101260703

102598177

107773017

107775663

4346149

9266043

9272617

100276896

123054591

123042107

123427806

8072117

100846775

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102608498 (cit-r.1 coexpression data)

Top 50 enrichment test to 102608498 (cit-r.1 coexpression data)


Species	cit	ath	bra	ghi	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	1	1	2	2	1	2	1	2	2	1	1	2	3	1	2	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102608498 (cit-r.1 coexpression data)

Top 50 enrichment test to 102608498 (cit-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**