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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102609060   low-temperature-induced 65 kDa protein 
 ath-u.5   AT4G25580   CAP160 protein 
 ath-u.5   LTI65   CAP160 protein 
 ath-u.5   LTI78   low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) 
 bra-r.6   103857129   low-temperature-induced 65 kDa protein-like 
 bra-r.6   103861574   low-temperature-induced 65 kDa protein 
 ghi-r.1   107943476   low-temperature-induced 65 kDa protein 
 ghi-r.1   107936859   low-temperature-induced 65 kDa protein 
 bna-r.1   125581688   low-temperature-induced 65 kDa protein-like 
 gma-u.5   PM39   seed maturation protein PM39 
 gma-u.5   100810490   low-temperature-induced 65 kDa protein 
 vvi-u.5   100260796   low-temperature-induced 65 kDa protein 
 ppo-u.5   7484381   low-temperature-induced 65 kDa protein 
 mtr-u.5   25485071   low-temperature-induced 65 kDa protein 
 mtr-u.5   25485072   low-temperature-induced 65 kDa protein 
 sly-u.5   101266908   low-temperature-induced 65 kDa protein-like 
 sot-r.1   102596667   low-temperature-induced 65 kDa protein-like 
 nta-r.1   107819933   uncharacterized LOC107819933 
 nta-r.1   107814505   low-temperature-induced 65 kDa protein-like 
 nta-r.1   107784000   uncharacterized LOC107784000 

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Top 50 coexpressed genes to 102609060 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102609060 (cit-r.1 coexpression data)

CoexMap"102609060"


citLOC102609060 | Entrez gene ID : 102609060    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta sbi osa tae hvu zma cre bdi
Paralog 1 3 2 2 1 2 1 1 2 1 1 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009737 [list] [network] response to abscisic acid  (46 genes)  IEA  
GO:0006950 [list] [network] response to stress  (1107 genes)  IEA  
GO CC
GO MF
Protein XP_006490382.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006490382.2)
Subcellular
localization
TargetP
other 9  (predict for XP_006490382.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102609060
ath-u.5
for
AT4G25580
ath-u.5
for
LTI65
ath-u.5
for
LTI78
bra-r.6
for
103857129
bra-r.6
for
103861574
ghi-r.1
for
107943476
ghi-r.1
for
107936859
bna-r.1
for
125581688
gma-u.5
for
PM39
gma-u.5
for
100810490
vvi-u.5
for
100260796
ppo-u.5
for
7484381
mtr-u.5
for
25485071
mtr-u.5
for
25485072
sly-u.5
for
101266908
sot-r.1
for
102596667
nta-r.1
for
107819933
nta-r.1
for
107814505
nta-r.1
for
107784000


Ortholog ID: 4419
Species cit ath ath ath bra bra bra ghi ghi bna gma gma vvi ppo mtr mtr sly sot nta nta nta
Symbol LOC102609060 AT4G25580 LTI65 LTI78 LOC103857129 LOC103861574 LOC103852107 LOC107943476 LOC107936859 LOC106412087 LOC100801440 LOC100790856 LOC100260796 LOC7484381 LOC25485071 LOC25485072 LOC101266908 LOC102596667 LOC107814505 LOC107784000 LOC107782725
Function* low-temperature-induced 65 kDa protein CAP160 protein CAP160 protein low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) low-temperature-induced 65 kDa protein-like low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein receptor-like protein EIX1 low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein low-temperature-induced 65 kDa protein-like low-temperature-induced 65 kDa protein-like low-temperature-induced 65 kDa protein-like uncharacterized LOC107784000 low-temperature-induced 65 kDa protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 2
bna00500 Starch and sucrose metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 6
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 5
sot04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta04016 MAPK signaling pathway - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102609060 828663 835306 835307 103857129 103861574 103852107 107943476 107936859 106412087 100801440 100790856 100260796 7484381 25485071 25485072 101266908 102596667 107814505 107784000 107782725
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