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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102626222   APO protein 3, mitochondrial 
 cit-r.1   102617800   APO protein 3, mitochondrial-like 
 ath-u.5   APO3   APO RNA-binding protein (DUF794) 
 bra-r.6   103837397   APO protein 3, mitochondrial 
 ghi-r.1   107946616   APO protein 3, mitochondrial 
 ghi-r.1   107946886   APO protein 3, mitochondrial 
 ghi-r.1   107886987   APO protein 3, mitochondrial 
 bna-r.1   106451936   APO protein 3, mitochondrial-like 
 bna-r.1   106366086   APO protein 3, mitochondrial-like 
 gma-u.5   100812693   APO protein 3, mitochondrial 
 gma-u.5   100811924   APO protein 3, mitochondrial 
 vvi-u.5   100854712   APO protein 3, mitochondrial 
 vvi-u.5   100240983   APO protein 3, mitochondrial 
 ppo-u.5   7457581   APO protein 3, mitochondrial 
 mtr-u.5   120576004   APO protein 3, mitochondrial 
 mtr-u.5   11405958   APO protein 3, mitochondrial 
 sly-u.5   101261651   APO protein 3, mitochondrial 
 sot-r.1   102585880   APO protein 3, mitochondrial 
 nta-r.1   107779914   APO protein 3, mitochondrial-like 
 nta-r.1   107775677   APO protein 3, mitochondrial 
 osa-u.5   4343818   APO protein 3, mitochondrial 
 zma-u.5   107521954   APO protein 3 mitochondrial 
 tae-r.2   123137716   APO protein 3, mitochondrial 
 hvu-r.1   123402038   APO protein 3, mitochondrial 
 sbi-r.1   8064289   APO protein 3, mitochondrial 
 bdi-r.1   100844907   APO protein 3, mitochondrial 

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Top 50 coexpressed genes to 102626222 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102626222 (cit-r.1 coexpression data)

CoexMap""


citLOC102626222 | Entrez gene ID : 102626222    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 2 2 2 1 2 1 1 2 1 1 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function APO protein 3, mitochondrial
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
Protein XP_006485090.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 2  (predict for XP_006485090.2)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_006485090.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

cit-r.1
for
102626222


cit-r.1
for
102617800


ath-u.5
for
APO3


bra-r.6
for
103837397


ghi-r.1
for
107946616


ghi-r.1
for
107946886


ghi-r.1
for
107886987


bna-r.1
for
106451936


bna-r.1
for
106366086


gma-u.5
for
100812693


gma-u.5
for
100811924


vvi-u.5
for
100854712


vvi-u.5
for
100240983


ppo-u.5
for
7457581


mtr-u.5
for
120576004


mtr-u.5
for
11405958


sly-u.5
for
101261651


sot-r.1
for
102585880


nta-r.1
for
107779914


nta-r.1
for
107775677


osa-u.5
for
4343818


zma-u.5
for
107521954


tae-r.2
for
123137716


hvu-r.1
for
123402038


sbi-r.1
for
8064289


bdi-r.1
for
100844907

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Ortholog ID: 8210
Species cit cit ath bra ghi ghi ghi bna bna gma gma vvi vvi ppo mtr mtr sly sot nta nta osa zma tae hvu sbi bdi
Symbol LOC102626222 LOC102617800 APO3 LOC103837397 LOC107946616 LOC107946886 LOC107886987 LOC106451936 LOC106366086 LOC100812693 LOC100811924 LOC100854712 LOC100240983 LOC7457581 LOC120576004 LOC11405958 LOC101261651 LOC102585880 LOC107779914 LOC107775677 LOC4343818 LOC107521954 LOC123137716 LOC123402038 LOC8064289 LOC100844907
Function* APO protein 3, mitochondrial APO protein 3, mitochondrial-like APO RNA-binding protein (DUF794) APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial-like APO protein 3, mitochondrial-like APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial-like APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3 mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial APO protein 3, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102626222 102617800 836314 103837397 107946616 107946886 107886987 106451936 106366086 100812693 100811924 100854712 100240983 7457581 120576004 11405958 101261651 102585880 107779914 107775677 4343818 107521954 123137716 123402038 8064289 100844907
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