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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g021750v5   uncharacterized protein 
 ath-u.5   AT1G29220   transcriptional regulator family protein 
 gma-u.5   100792733   uncharacterized LOC100792733 
 gma-u.5   100527074   uncharacterized LOC100527074 
 sly-u.5   101245911   uncharacterized LOC101245911 
 osa-u.5   9270029   uncharacterized LOC9270029 
 zma-u.5   103636629   Putative HCNGP-related transcriptional regulator family protein 
 zma-u.5   100283832   transcription regulator 
 bra-r.6   103840506   SAP30-binding protein 
 vvi-u.5   100854923   uncharacterized LOC100854923 
 ppo-u.5   7476332   uncharacterized LOC7476332 
 ppo-u.5   7472296   uncharacterized LOC7472296 
 mtr-u.5   11412455   SAP30-binding protein 
 tae-r.2   123062116   SAP30-binding protein 
 tae-r.2   123070841   SAP30-binding protein 
 tae-r.2   123079232   SAP30-binding protein 
 hvu-r.1   123444456   SAP30-binding protein 
 ghi-r.1   107925270   SAP30-binding protein 
 ghi-r.1   107913160   SAP30-binding protein 
 bna-r.1   106402263   SAP30-binding protein 
 bna-r.1   106367409   SAP30-binding protein 
 sbi-r.1   8079227   serine/arginine repetitive matrix protein 1 
 sot-r.1   102604553   uncharacterized LOC102604553 
 cit-r.1   102608080   uncharacterized LOC102608080 
 bdi-r.1   100823984   SAP30-binding protein 
 nta-r.1   107768093   uncharacterized LOC107768093 
 nta-r.1   107804423   uncharacterized LOC107804423 

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Top 50 coexpressed genes to CHLRE_01g021750v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g021750v5 (cre-r.1 coexpression data)

CoexMap"5715216"


creCHLRE_01g021750v5 | Entrez gene ID : 5715216    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 2 1 1 2 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (405 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042928399.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  mito 1,  extr 1,  E.R. 1,  cyto_mito 1,  mito_plas 1  (predict for XP_042928399.1)
Subcellular
localization
TargetP
other 6  (predict for XP_042928399.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g021750v5
ath-u.5
for
AT1G29220
gma-u.5
for
100792733
gma-u.5
for
100527074
sly-u.5
for
101245911
osa-u.5
for
9270029
zma-u.5
for
103636629
zma-u.5
for
100283832
bra-r.6
for
103840506
vvi-u.5
for
100854923
ppo-u.5
for
7476332
ppo-u.5
for
7472296
mtr-u.5
for
11412455
tae-r.2
for
123062116
tae-r.2
for
123070841
tae-r.2
for
123079232
hvu-r.1
for
123444456
ghi-r.1
for
107925270
ghi-r.1
for
107913160
bna-r.1
for
106402263
bna-r.1
for
106367409
sbi-r.1
for
8079227
sot-r.1
for
102604553
cit-r.1
for
102608080
bdi-r.1
for
100823984
nta-r.1
for
107768093
nta-r.1
for
107804423


Ortholog ID: 8720
Species cre ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g021750v5 AT1G29220 LOC100792733 LOC100527074 LOC101245911 LOC9270029 LOC103636629 LOC100283832 LOC103840506 LOC100854923 LOC7476332 LOC7472296 LOC11412455 LOC123062116 LOC123070841 LOC123079232 LOC123444456 LOC107925270 LOC107913160 LOC106402263 LOC106367409 LOC8079227 LOC102604553 LOC102608080 LOC100823984 LOC107768093 LOC107804423
Function* uncharacterized protein transcriptional regulator family protein uncharacterized LOC100792733 uncharacterized LOC100527074 uncharacterized LOC101245911 uncharacterized LOC9270029 Putative HCNGP-related transcriptional regulator family protein transcription regulator SAP30-binding protein uncharacterized LOC100854923 uncharacterized LOC7476332 uncharacterized LOC7472296 SAP30-binding protein SAP30-binding protein SAP30-binding protein SAP30-binding protein SAP30-binding protein SAP30-binding protein SAP30-binding protein SAP30-binding protein SAP30-binding protein serine/arginine repetitive matrix protein 1 uncharacterized LOC102604553 uncharacterized LOC102608080 SAP30-binding protein uncharacterized LOC107768093 uncharacterized LOC107804423
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
zma03040 Spliceosome 2
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 3
nta04070 Phosphatidylinositol signaling system 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715216 839796 100792733 100527074 101245911 9270029 103636629 100283832 103840506 100854923 7476332 7472296 11412455 123062116 123070841 123079232 123444456 107925270 107913160 106402263 106367409 8079227 102604553 102608080 100823984 107768093 107804423
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