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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g032250v5   uncharacterized protein 
 gma-u.5   100798821   NF-kappa-B-activating protein 
 gma-u.5   100792985   NKAP-like protein 
 sly-u.5   101256841   NF-kappa-B-activating protein 
 osa-u.5   4347253   uncharacterized LOC4347253 
 zma-u.5   100191706   uncharacterized LOC100191706 
 bra-r.6   103865194   NKAP-like protein 
 bra-r.6   103864597   NF-kappa-B-activating protein-like 
 bra-r.6   103836721   NF-kappa-B-activating protein 
 vvi-u.5   100853496   uncharacterized LOC100853496 
 ppo-u.5   7464684   uncharacterized LOC7464684 
 ppo-u.5   7480693   uncharacterized LOC7480693 
 mtr-u.5   25500833   NKAP-like protein 
 tae-r.2   123112187   NF-kappa-B-activating protein 
 tae-r.2   123121723   NF-kappa-B-activating protein 
 hvu-r.1   123398628   NF-kappa-B-activating protein-like 
 ghi-r.1   107931598   NF-kappa-B-activating protein 
 ghi-r.1   107930487   NF-kappa-B-activating protein 
 bna-r.1   125577661   NF-kappa-B-activating protein-like 
 bna-r.1   125583923   NF-kappa-B-activating protein-like 
 bna-r.1   111214016   NF-kappa-B-activating protein-like 
 sbi-r.1   8081050   NF-kappa-B-activating protein 
 sot-r.1   102600204   NF-kappa-B-activating protein 
 cit-r.1   102609668   uncharacterized LOC102609668 
 bdi-r.1   100845029   NF-kappa-B-activating protein 
 nta-r.1   107768732   uncharacterized LOC107768732 
 nta-r.1   107784225   uncharacterized LOC107784225 

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Top 50 coexpressed genes to CHLRE_01g032250v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g032250v5 (cre-r.1 coexpression data)

CoexMap"5715398"


creCHLRE_01g032250v5 | Entrez gene ID : 5715398      
Species cre gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta ath
Paralog 1 2 1 1 1 3 1 2 1 2 1 2 3 1 1 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (81 genes)  IEA  
Protein XP_001689600.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 3  (predict for XP_001689600.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_001689600.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g032250v5
gma-u.5
for
100798821
gma-u.5
for
100792985
sly-u.5
for
101256841
osa-u.5
for
4347253
zma-u.5
for
100191706
bra-r.6
for
103865194
bra-r.6
for
103864597
bra-r.6
for
103836721
vvi-u.5
for
100853496
ppo-u.5
for
7464684
ppo-u.5
for
7480693
mtr-u.5
for
25500833
tae-r.2
for
123112187
tae-r.2
for
123121723
hvu-r.1
for
123398628
ghi-r.1
for
107931598
ghi-r.1
for
107930487
bna-r.1
for
125577661
bna-r.1
for
125583923
bna-r.1
for
111214016
sbi-r.1
for
8081050
sot-r.1
for
102600204
cit-r.1
for
102609668
bdi-r.1
for
100845029
nta-r.1
for
107768732
nta-r.1
for
107784225


Ortholog ID: 4762
Species cre gma gma sly osa zma bra bra bra vvi ppo ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g032250v5 LOC100798821 LOC100792985 LOC101256841 LOC4347253 LOC100191706 LOC103865194 LOC103864597 LOC103836721 LOC100853496 LOC7464684 LOC7480693 LOC25500833 LOC123121723 LOC123398628 LOC107931598 LOC107930487 LOC125583923 LOC106392177 LOC8081050 LOC102600204 LOC102609668 LOC100845029 LOC107768732 LOC107784225
Function* uncharacterized protein NF-kappa-B-activating protein NKAP-like protein NF-kappa-B-activating protein uncharacterized LOC4347253 uncharacterized LOC100191706 NKAP-like protein NF-kappa-B-activating protein-like NF-kappa-B-activating protein uncharacterized LOC100853496 uncharacterized LOC7464684 uncharacterized LOC7480693 NKAP-like protein NF-kappa-B-activating protein NF-kappa-B-activating protein-like NF-kappa-B-activating protein NF-kappa-B-activating protein NF-kappa-B-activating protein-like NF-kappa-B-activating protein-like NF-kappa-B-activating protein NF-kappa-B-activating protein uncharacterized LOC102609668 NF-kappa-B-activating protein uncharacterized LOC107768732 uncharacterized LOC107784225
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715398 100798821 100792985 101256841 4347253 100191706 103865194 103864597 103836721 100853496 7464684 7480693 25500833 123121723 123398628 107931598 107930487 125583923 106392177 8081050 102600204 102609668 100845029 107768732 107784225
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