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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g036100v5   uncharacterized protein 
 ath-u.5   AT3G27640   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100819114   denticleless protein homolog 
 sly-u.5   101259306   uncharacterized LOC101259306 
 osa-u.5   4333813   uncharacterized LOC4333813 
 zma-u.5   100284874   uncharacterized LOC100284874 
 bra-r.6   103875199   denticleless protein homolog 
 mtr-u.5   11421076   denticleless protein homolog 
 tae-r.2   123082390   denticleless protein homolog 
 tae-r.2   123090781   denticleless protein homolog 
 tae-r.2   123099427   denticleless protein homolog 
 ghi-r.1   107938774   denticleless protein homolog 
 ghi-r.1   107926416   denticleless protein homolog 
 sot-r.1   102602979   denticleless protein homolog A 
 bdi-r.1   100841988   denticleless protein homolog 
 nta-r.1   107823651   uncharacterized LOC107823651 
 nta-r.1   107779387   uncharacterized LOC107779387 
 nta-r.1   107780441   uncharacterized LOC107780441 

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Top 50 coexpressed genes to CHLRE_01g036100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g036100v5 (cre-r.1 coexpression data)

CoexMap"5715472"


creCHLRE_01g036100v5 | Entrez gene ID : 5715472      
Species cre ath gma sly osa zma bra mtr tae ghi sot bdi nta vvi ppo hvu bna cit sbi
Paralog 1 1 1 1 1 1 1 1 3 2 1 1 3 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (98 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (114 genes)  IEA  
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042928636.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cysk 1  (predict for XP_042928636.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_042928636.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g036100v5
ath-u.5
for
AT3G27640
gma-u.5
for
100819114
sly-u.5
for
101259306
osa-u.5
for
4333813
zma-u.5
for
100284874
bra-r.6
for
103875199
mtr-u.5
for
11421076
tae-r.2
for
123082390
tae-r.2
for
123090781
tae-r.2
for
123099427
ghi-r.1
for
107938774
ghi-r.1
for
107926416
sot-r.1
for
102602979
bdi-r.1
for
100841988
nta-r.1
for
107823651
nta-r.1
for
107779387
nta-r.1
for
107780441


Ortholog ID: 6887
Species cre ath gma sly osa zma bra mtr tae tae tae ghi sot bdi nta nta nta
Symbol CHLRE_01g036100v5 AT3G27640 LOC100819114 LOC101259306 LOC4333813 LOC100284874 LOC103875199 LOC11421076 LOC123082390 LOC123090781 LOC123099427 LOC107926416 LOC102602979 LOC100841988 LOC107823651 LOC107779387 LOC107780441
Function* uncharacterized protein Transducin/WD40 repeat-like superfamily protein denticleless protein homolog uncharacterized LOC101259306 uncharacterized LOC4333813 uncharacterized LOC100284874 denticleless protein homolog denticleless protein homolog denticleless protein homolog denticleless protein homolog denticleless protein homolog denticleless protein homolog denticleless protein homolog A denticleless protein homolog uncharacterized LOC107823651 uncharacterized LOC107779387 uncharacterized LOC107780441
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03440 Homologous recombination 3
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
ath03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 12
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 3
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 7
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 9
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot03420 Nucleotide excision repair 3
sot03430 Mismatch repair 3
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715472 822386 100819114 101259306 4333813 100284874 103875199 11421076 123082390 123090781 123099427 107926416 102602979 100841988 107823651 107779387 107780441
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