ATTED-II : GeneCoexpression result

Species	Gene	Description
cre-r.1	CHLRE_01g042950v5	uncharacterized protein
ath-u.5	AT1G36980	transmembrane 50A-like protein
gma-u.5	100306592	uncharacterized LOC100306592
gma-u.5	100820532	transmembrane protein 50 homolog
sly-u.5	101257724	uncharacterized LOC101257724
osa-u.5	4329713	uncharacterized LOC4329713
osa-u.5	4347235	uncharacterized LOC4347235
zma-u.5	100281814	uncharacterized LOC100281814
zma-u.5	100285861	uncharacterized LOC100285861
bra-r.6	103868798	transmembrane protein 50A
vvi-u.5	100242038	uncharacterized LOC100242038
ppo-u.5	7463183	uncharacterized LOC7463183
ppo-u.5	7460928	uncharacterized LOC7460928
mtr-u.5	11416140	transmembrane protein 50 homolog
tae-r.2	123103943	transmembrane protein 50 homolog
tae-r.2	123121712	transmembrane protein 50 homolog
tae-r.2	780593	transmembrane protein 50 homolog
hvu-r.1	123398559	transmembrane protein 50 homolog
ghi-r.1	107962482	transmembrane protein 50 homolog
ghi-r.1	107951435	transmembrane protein 50 homolog
ghi-r.1	107925944	transmembrane protein 50 homolog
bna-r.1	106357826	transmembrane protein 50A
bna-r.1	106348461	transmembrane protein 50A-like
sbi-r.1	8062770	transmembrane protein 50 homolog
sbi-r.1	8072604	transmembrane protein 50 homolog
sot-r.1	102589977	transmembrane protein 50 homolog
cit-r.1	102608788	uncharacterized LOC102608788
bdi-r.1	100840360	transmembrane protein 50 homolog
bdi-r.1	100829218	transmembrane protein 50 homolog
nta-r.1	107791890	uncharacterized LOC107791890
nta-r.1	107792436	uncharacterized LOC107792436

Annotation

functional annotation

KEGG

GO BP

GO:0006623 [list] [network] protein targeting to vacuole	(12 genes)	IEA
GO:0032511 [list] [network] late endosome to vacuole transport via multivesicular body sorting pathway	(16 genes)	IEA

GO CC

GO MF

Protein

XP_001690170.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, vacu 1, E.R. 1, golg 1

(predict for XP_001690170.2)

Subcellular
localization
TargetP

other 8

(predict for XP_001690170.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	cre-r.1 for CHLRE_01g042950v5	ath-u.5 for AT1G36980	gma-u.5 for 100306592	gma-u.5 for 100820532	sly-u.5 for 101257724	osa-u.5 for 4329713	osa-u.5 for 4347235	zma-u.5 for 100281814	zma-u.5 for 100285861	bra-r.6 for 103868798	vvi-u.5 for 100242038	ppo-u.5 for 7463183	ppo-u.5 for 7460928	mtr-u.5 for 11416140	tae-r.2 for 123103943	tae-r.2 for 123121712	tae-r.2 for 780593	hvu-r.1 for 123398559	ghi-r.1 for 107962482	ghi-r.1 for 107951435	ghi-r.1 for 107925944	bna-r.1 for 106357826	bna-r.1 for 106348461	sbi-r.1 for 8062770	sbi-r.1 for 8072604	sot-r.1 for 102589977	cit-r.1 for 102608788	bdi-r.1 for 100840360	bdi-r.1 for 100829218	nta-r.1 for 107791890	nta-r.1 for 107792436

Ortholog

Ortholog ID: 6415

Species

cre

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

uncharacterized protein

transmembrane 50A-like protein

uncharacterized LOC100306592

transmembrane protein 50 homolog

uncharacterized LOC101257724

uncharacterized LOC4329713

uncharacterized LOC4347235

uncharacterized LOC100281814

uncharacterized LOC100285861

transmembrane protein 50A

uncharacterized LOC100242038

uncharacterized LOC7463183

uncharacterized LOC7460928

transmembrane protein 50 homolog

transmembrane protein 50A

transmembrane protein 50A-like

transmembrane protein 50 homolog

uncharacterized LOC102608788

transmembrane protein 50 homolog

uncharacterized LOC107791890

uncharacterized LOC107792436

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	3
cre04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	4
ath00190	Oxidative phosphorylation	3
ath04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3
gma04130	SNARE interactions in vesicular transport	2
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03020	RNA polymerase	4
osa03420	Nucleotide excision repair	4
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04130	SNARE interactions in vesicular transport	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	4
zma03250	Viral life cycle - HIV-1	3
zma04145	Phagosome	2
zma03272	Virion - Hepatitis viruses	2
zma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04145	Phagosome	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	9
ppo04142	Lysosome	7
ppo04145	Phagosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03083	Polycomb repressive complex	2
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	7
tae04144	Endocytosis	2
tae04145	Phagosome	2
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	5
tae03083	Polycomb repressive complex	4
tae04120	Ubiquitin mediated proteolysis	4
tae04141	Protein processing in endoplasmic reticulum	4
tae00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	5
tae04144	Endocytosis	3
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae00600	Sphingolipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03022	Basal transcription factors	2
sbi04120	Ubiquitin mediated proteolysis	2
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	4
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	4
bdi04145	Phagosome	4
bdi04148	Efferocytosis	4
bdi00904	Diterpenoid biosynthesis	3
bdi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2
bdi04145	Phagosome	2
bdi04148	Efferocytosis	2
bdi03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

5715605

840608

100306592

100820532

101257724

4329713

4347235

100281814

100285861

103868798

100242038

7463183

7460928

11416140

123103943

123121712

780593

123398559

107962482

107951435

107922594

106357826

106348461

8062770

8072604

102589977

102608788

100840360

100829218

107791890

107792436

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to CHLRE_01g042950v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_01g042950v5 (cre-r.1 coexpression data)


Species	cre	ath	gma	sly	osa	zma	bra	vvi	ppo	mtr	tae	hvu	ghi	bna	sbi	sot	cit	bdi	nta
Paralog	1	1	2	1	2	2	1	1	2	1	3	1	3	2	2	1	1	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to CHLRE_01g042950v5 (cre-r.1 coexpression data)

Top 50 enrichment test to CHLRE_01g042950v5 (cre-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**