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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g044150v5   uncharacterized protein 
 ath-u.5   FIO1   methyltransferase 
 gma-u.5   100819552   U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase 
 gma-u.5   100802073   RNA N6-adenosine-methyltransferase mettl16 
 sly-u.5   101254840   uncharacterized LOC101254840 
 osa-u.5   4328120   uncharacterized LOC4328120 
 zma-u.5   100275693   uncharacterized LOC100275693 
 bra-r.6   103864244   RNA N6-adenosine-methyltransferase mettl16 
 vvi-u.5   100247029   uncharacterized LOC100247029 
 ppo-u.5   7470383   uncharacterized LOC7470383 
 mtr-u.5   112421092   RNA N6-adenosine-methyltransferase mettl16 
 tae-r.2   123143395   RNA N6-adenosine-methyltransferase mettl16 
 tae-r.2   123135878   RNA N6-adenosine-methyltransferase mettl16 
 tae-r.2   123131893   RNA N6-adenosine-methyltransferase mettl16 
 hvu-r.1   123403784   RNA N6-adenosine-methyltransferase mettl16 
 ghi-r.1   107945042   RNA N6-adenosine-methyltransferase mettl16 
 ghi-r.1   107932657   U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase 
 bna-r.1   106420602   RNA N6-adenosine-methyltransferase mettl16 
 bna-r.1   106420607   RNA N6-adenosine-methyltransferase mettl16 
 sbi-r.1   8068259   methyltransferase-like protein 16 
 sot-r.1   102594731   methyltransferase-like protein 16 
 cit-r.1   102612205   uncharacterized LOC102612205 
 bdi-r.1   100835129   U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase 
 nta-r.1   107785444   uncharacterized LOC107785444 
 nta-r.1   107807777   uncharacterized LOC107807777 
 nta-r.1   107785301   uncharacterized LOC107785301 

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Top 50 coexpressed genes to CHLRE_01g044150v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g044150v5 (cre-r.1 coexpression data)

CoexMap"5715630"


creCHLRE_01g044150v5 | Entrez gene ID : 5715630    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070475 [list] [network] rRNA base methylation  (14 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
GO:0052907 [list] [network] 23S rRNA (adenine(1618)-N(6))-methyltransferase activity  (1 genes)  IEA  
Protein XP_042928769.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 3,  pero 3,  cyto_pero 3  (predict for XP_042928769.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042928769.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g044150v5
ath-u.5
for
FIO1
gma-u.5
for
100819552
gma-u.5
for
100802073
sly-u.5
for
101254840
osa-u.5
for
4328120
zma-u.5
for
100275693
bra-r.6
for
103864244
vvi-u.5
for
100247029
ppo-u.5
for
7470383
mtr-u.5
for
112421092
tae-r.2
for
123143395
tae-r.2
for
123135878
tae-r.2
for
123131893
hvu-r.1
for
123403784
ghi-r.1
for
107945042
ghi-r.1
for
107932657
bna-r.1
for
106420602
bna-r.1
for
106420607
sbi-r.1
for
8068259
sot-r.1
for
102594731
cit-r.1
for
102612205
bdi-r.1
for
100835129
nta-r.1
for
107785444
nta-r.1
for
107807777
nta-r.1
for
107785301


Ortholog ID: 8881
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta nta
Symbol CHLRE_01g044150v5 FIO1 LOC100819552 LOC100802073 LOC101254840 LOC4328120 LOC100275693 LOC103864244 LOC100247029 LOC7470383 LOC112421092 LOC123143395 LOC123135878 LOC123131893 LOC123403784 LOC107945042 LOC107932657 LOC106420602 LOC106420607 LOC8068259 LOC102594731 LOC102612205 LOC100835129 LOC107785444 LOC107807777 LOC107785301
Function* uncharacterized protein methyltransferase U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase RNA N6-adenosine-methyltransferase mettl16 uncharacterized LOC101254840 uncharacterized LOC4328120 uncharacterized LOC100275693 RNA N6-adenosine-methyltransferase mettl16 uncharacterized LOC100247029 uncharacterized LOC7470383 RNA N6-adenosine-methyltransferase mettl16 RNA N6-adenosine-methyltransferase mettl16 RNA N6-adenosine-methyltransferase mettl16 RNA N6-adenosine-methyltransferase mettl16 RNA N6-adenosine-methyltransferase mettl16 RNA N6-adenosine-methyltransferase mettl16 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase RNA N6-adenosine-methyltransferase mettl16 RNA N6-adenosine-methyltransferase mettl16 methyltransferase-like protein 16 methyltransferase-like protein 16 uncharacterized LOC102612205 U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase uncharacterized LOC107785444 uncharacterized LOC107807777 uncharacterized LOC107785301
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03008 Ribosome biogenesis in eukaryotes 2
zma03083 Polycomb repressive complex 2
zma04712 Circadian rhythm - plant 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
ghi01212 Fatty acid metabolism 2
ghi04146 Peroxisome 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03008 Ribosome biogenesis in eukaryotes 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03008 Ribosome biogenesis in eukaryotes 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715630 816642 100819552 100802073 101254840 4328120 100275693 103864244 100247029 7470383 112421092 123143395 123135878 123131893 123403784 107945042 107932657 106420602 106420607 8068259 102594731 102612205 100835129 107785444 107807777 107785301
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