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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_01g052100v5   uncharacterized protein 
 ath-u.5   EMB3105   Ribosomal L18p/L5e family protein 
 gma-u.5   100778569   50S ribosomal protein L18, chloroplastic 
 gma-u.5   100306308   50S ribosomal protein L18, chloroplastic 
 sly-u.5   101250874   50S ribosomal protein L18, chloroplastic 
 osa-u.5   4334651   50S ribosomal protein L18, chloroplastic-like 
 zma-u.5   100284921   50S ribosomal protein L18 
 bra-r.6   103833012   50S ribosomal protein L18, chloroplastic 
 vvi-u.5   100261418   50S ribosomal protein L18-like 
 ppo-u.5   18110256   50S ribosomal protein L18, chloroplastic 
 mtr-u.5   11444979   50S ribosomal protein L18, chloroplastic 
 tae-r.2   123114075   50S ribosomal protein L18, chloroplastic 
 tae-r.2   123123574   50S ribosomal protein L18, chloroplastic 
 tae-r.2   123087841   50S ribosomal protein L18, chloroplastic 
 hvu-r.1   123453134   50S ribosomal protein L18, chloroplastic-like 
 ghi-r.1   107913961   50S ribosomal protein L18, chloroplastic 
 ghi-r.1   107897860   50S ribosomal protein L18, chloroplastic 
 bna-r.1   106422522   50S ribosomal protein L18, chloroplastic 
 bna-r.1   106360543   50S ribosomal protein L18, chloroplastic-like 
 sbi-r.1   8079691   50S ribosomal protein L18, chloroplastic 
 sot-r.1   102595549   50S ribosomal protein L18, chloroplastic 
 cit-r.1   102611774   50S ribosomal protein L18, chloroplastic-like 
 bdi-r.1   100822205   50S ribosomal protein L18, chloroplastic 
 nta-r.1   107771278   large ribosomal subunit protein uL18c 
 nta-r.1   107830818   large ribosomal subunit protein uL18c 

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Top 50 coexpressed genes to CHLRE_01g052100v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_01g052100v5 (cre-r.1 coexpression data)

CoexMap"5715771"


creCHLRE_01g052100v5 | Entrez gene ID : 5715771      
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 1 1 3 1 2 2 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03010 [list] [network] Ribosome (149 genes)
GO BP
GO:0006412 [list] [network] translation  (268 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (168 genes)  IEA  
GO MF
GO:0008097 [list] [network] 5S rRNA binding  (4 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (164 genes)  IEA  
Protein XP_001690256.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_001690256.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_001690256.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_01g052100v5
ath-u.5
for
EMB3105
gma-u.5
for
100778569
gma-u.5
for
100306308
sly-u.5
for
101250874
osa-u.5
for
4334651
zma-u.5
for
100284921
bra-r.6
for
103833012
vvi-u.5
for
100261418
ppo-u.5
for
18110256
mtr-u.5
for
11444979
tae-r.2
for
123114075
tae-r.2
for
123123574
tae-r.2
for
123087841
hvu-r.1
for
123453134
ghi-r.1
for
107913961
ghi-r.1
for
107897860
bna-r.1
for
106422522
bna-r.1
for
106360543
sbi-r.1
for
8079691
sot-r.1
for
102595549
cit-r.1
for
102611774
bdi-r.1
for
100822205
nta-r.1
for
107771278
nta-r.1
for
107830818


Ortholog ID: 10506
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_01g052100v5 EMB3105 LOC100778569 LOC100306308 LOC101250874 LOC4334651 LOC100284921 LOC103833012 LOC100261418 LOC18110256 LOC11444979 LOC123114075 LOC123123574 LOC123087841 LOC123453134 LOC107913961 LOC107897860 LOC106422522 LOC106360543 LOC8079691 LOC102595549 LOC102611774 LOC100822205 LOC107771278 LOC107830818
Function* uncharacterized protein Ribosomal L18p/L5e family protein 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic-like 50S ribosomal protein L18 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18-like 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic-like 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic-like 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic-like 50S ribosomal protein L18, chloroplastic large ribosomal subunit protein uL18c large ribosomal subunit protein uL18c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi00260 Glycine, serine and threonine metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715771 841255 100778569 100306308 101250874 4334651 100284921 103833012 100261418 18110256 11444979 123114075 123123574 123087841 123453134 107913961 107897860 106422522 106360543 8079691 102595549 102611774 100822205 107771278 107830818
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