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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_10g436600v5   uncharacterized protein 
 ath-u.5   emb1688   Minichromosome maintenance (MCM2/3/5) family protein 
 gma-u.5   100801862   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 gma-u.5   100796145   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 sly-u.5   101267706   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 osa-u.5   4335637   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 zma-u.5   100285891   Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 bra-r.6   103831170   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 vvi-u.5   100247229   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ppo-u.5   7455878   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ppo-u.5   7479622   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 mtr-u.5   11446406   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 mtr-u.5   11429085   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 tae-r.2   123189033   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 tae-r.2   123053126   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 tae-r.2   123045288   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 hvu-r.1   123426517   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 ghi-r.1   107933405   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 ghi-r.1   107898631   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 bna-r.1   106405828   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 bna-r.1   106454172   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 sbi-r.1   8070789   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 sot-r.1   102581593   putative ribosome biogenesis GTPase RsgA 1 
 cit-r.1   102627863   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 bdi-r.1   100831693   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 
 nta-r.1   107788041   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like 
 nta-r.1   107787854   small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial 

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Top 50 coexpressed genes to CHLRE_10g436600v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_10g436600v5 (cre-r.1 coexpression data)

CoexMap"5715970"


creCHLRE_10g436600v5 | Entrez gene ID : 5715970    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 1 1 2 2 3 1 2 2 1 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00730 [list] [network] Thiamine metabolism (13 genes)
GO BP
GO CC
GO MF
GO:0003924 [list] [network] GTPase activity  (103 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (130 genes)  IEA  
Protein XP_042920126.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_042920126.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_042920126.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_10g436600v5
ath-u.5
for
emb1688
gma-u.5
for
100801862
gma-u.5
for
100796145
sly-u.5
for
101267706
osa-u.5
for
4335637
zma-u.5
for
100285891
bra-r.6
for
103831170
vvi-u.5
for
100247229
ppo-u.5
for
7455878
ppo-u.5
for
7479622
mtr-u.5
for
11446406
mtr-u.5
for
11429085
tae-r.2
for
123189033
tae-r.2
for
123053126
tae-r.2
for
123045288
hvu-r.1
for
123426517
ghi-r.1
for
107933405
ghi-r.1
for
107898631
bna-r.1
for
106405828
bna-r.1
for
106454172
sbi-r.1
for
8070789
sot-r.1
for
102581593
cit-r.1
for
102627863
bdi-r.1
for
100831693
nta-r.1
for
107788041
nta-r.1
for
107787854


Ortholog ID: 8759
Species cre ath gma gma sly osa zma bra vvi ppo ppo mtr mtr tae tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHLRE_10g436600v5 emb1688 LOC100801862 LOC100796145 LOC101267706 LOC4335637 LOC100285891 LOC103831170 LOC100247229 LOC7455878 LOC7479622 LOC11446406 LOC11429085 LOC123189033 LOC123053126 LOC123045288 LOC123426517 LOC107933405 LOC107898631 LOC106405828 LOC106454172 LOC8070789 LOC102581593 LOC102627863 LOC100831693 LOC107788041 LOC107787854
Function* uncharacterized protein Minichromosome maintenance (MCM2/3/5) family protein small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial putative ribosome biogenesis GTPase RsgA 1 small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00730 Thiamine metabolism 3
gma03040 Spliceosome 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00730 Thiamine metabolism 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
bna00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta04141 Protein processing in endoplasmic reticulum 4
nta03040 Spliceosome 3
nta04144 Endocytosis 3
nta00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03040 Spliceosome 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04144 Endocytosis 3
nta00730 Thiamine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5715970 843064 100801862 100796145 101267706 4335637 100285891 103831170 100247229 7455878 7479622 11446406 11429085 123189033 123053126 123045288 123426517 107933405 107898631 106405828 106454172 8070789 102581593 102627863 100831693 107788041 107787854
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